| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4396 |
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| Symbol | |
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| ID | 5107249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4818619 |
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| End bp | 4819548 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505662 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001189875 |
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| Protein GI | 146309410 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.20014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA CCGAACTGCG CTACATCGTC ACCCTCGCCC AGGAACAGCA TTTCGGCCGC
GCCGCGGAAC GCTGCCACGT CAGCCAGCCG ACCCTGTCGG TGGGCGTGAA GAAGCTGGAG
GACGAGCTCG GCGTACTGAT CTTCGAGCGC AGCAAGAGCG CCGTGCGCCT GACCCCGGTC
GGTGAGGGCA TCGTCACCCA GGCGCAGAAG GTGCTGGAGC AGGCCCAGGG CATTCGCGAA
CTGGCCCAGG CCGGCAAGAA CCAGCTGACC GCCCCGCTGA AGATCGGCGC CATCTACACC
GTCGGCCCCT ATCTGTTCCC GCACCTGATT CCACAGCTGC ACCGGGTCGC CCCGGACATG
CCGCTGTACA TCGAGGAAAA CTTCACCCAC ATCCTGCGCG ACAAGCTGCG CACCGGCGAG
CTGGACGCCA TCATCATCGC CCTGCCGTTC CAGGAAGCCG ATGTACTGAC CAAGCCGCTG
TACGACGAGC CCTTCTACGC GCTGCTGCCG GCCGGCCACC CCTGGGCAGC GCTGGACACC
ATCGACACCA AGCTGCTCAA CGACAAGAGC CTGCTGCTGC TCGGCGAGGG CCACTGCTTC
CGCGATCAGG TGCTGGAAGC CTGCCCGACC CTGCGCAAGG GCGGTGACGA TCACGGCAAG
CACACCACGG TGGAATCCAG CTCGCTGGAA ACCATCCGCC ATATGGTCGC CTCCGGCCTC
GGCGTGTCGA TCCTGCCGTT CTCGGCAGTG GACAGCCATC ACTACGCGCC GGGCGTGATC
GAAGTGCGTC CGCTCAGCGC GCCGGTGCCC TTCCGCACCG TGGCCATCGC CTGGCGCGCC
AGCTTCCCGC GGCCCAACGC CATCGAAGTG CTGGCCGACT CGATCCGCCT CTGCTCGGTC
GCCCGCAGCC CGCAGACCAA GGCAGTCTGA
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| Protein sequence | MTLTELRYIV TLAQEQHFGR AAERCHVSQP TLSVGVKKLE DELGVLIFER SKSAVRLTPV
GEGIVTQAQK VLEQAQGIRE LAQAGKNQLT APLKIGAIYT VGPYLFPHLI PQLHRVAPDM
PLYIEENFTH ILRDKLRTGE LDAIIIALPF QEADVLTKPL YDEPFYALLP AGHPWAALDT
IDTKLLNDKS LLLLGEGHCF RDQVLEACPT LRKGGDDHGK HTTVESSSLE TIRHMVASGL
GVSILPFSAV DSHHYAPGVI EVRPLSAPVP FRTVAIAWRA SFPRPNAIEV LADSIRLCSV
ARSPQTKAV
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