| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4356 |
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| Symbol | |
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| ID | 5107209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4772363 |
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| End bp | 4773628 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505622 |
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| Product | outer membrane porin |
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| Protein accession | YP_001189835 |
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| Protein GI | 146309370 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGC ACCACAGCTC CCTCTGCCAG CTGCTTTGCG GCGGCGCCGT ACTGATCGCC
GCCAGCCCCG CCAGCGCCGC CTTCGTCGAC GACAGCAAGG CCGTACTCGA TGCGCGCAAT
TTCTACTTCA ATCGCGACTT CCGCCAGAGC GGCGCGGCGC AGAGCAAGGC CGAGGAATGG
GCGCAGGGCT TCATGCTGCG CTTCGAGTCC GGCTACACCG AGGGGCCCAT CGGTTTCGGC
ATCGACGCCA TCGGCCTGCT CGGTCTCAAG CTCGACTCCA GCCCGGACCG CATCGGCACC
GGCCTGCTGA AAAGCGACCG CGAGGCGCCC AGACGCGCCC AGGACGAATA CGGCGAAGCC
GGCTTCACCG CCAAGCTGCG CGCCTCCAAC AGCACCCTAA AGCTCGGTAC CCTGCAACCG
CTGCTGCCGG CGCTGATGCG CAACGACAGC CGCCTGCTGC CGCAGACCTT TCGCGGTGCC
TGGCTGAGCA GCAACGAGAT CGAGGGGCTG AGCCTGGACC TCGGCCGACT GGACCGGGTC
AACCAGCGCG ACTCTTCGGA TAACGAGGAA ATGGCCGTGT TCAATGGCGG CCGCCGCAAC
ATCGTGCTGG GCAGCACGCG GACCAGCGAC GAGTTCATCT TCGCCGGCGG CCGCTACCAG
TGGACTCCGG AGCTCGCCAC CAGCTACTAC TACGGCGGCC TCGACGGCAT CTACAAGCAG
CACCTGGTCA ACCTGGTGCA CCAGCTGCCG CTGGGCGAGG GCCAGAGCTT CAAGTCGGAC
ATCCGCTACG CGCGCTCCAC CGATGATGGC GGCAGCAACG TCGACAACGA CGCCTTCGGT
GCGCTGTTCA CCTATCGCCT CGGCAGCCAC GGCTTCACCG CCGGCTACCA GCACCTGTCC
GGCGACACCG GCTTCGCCTA CATCGCCGGA GCCGACAACG CGCTGATCAA CCTGGTGCAA
ATCAACGACT TCGGCAACCA GGACGAGCGC TCCTGGCAGC TGCGCTACGA CTTCGACTTC
GCCGCCCTCG GCGTCCCCGG CCTGAGCCTG ATGACCCGTT ACCTGTCCGG CGACAACGTC
GACCGCGGCG CCGGGCAAAG CGAGGGCAAG ACCTGGGAGC GCAACACCGA CCTGGCCTAC
GTGGTGCAGA GCGGCCCGCT GAAGAACCTC GGCCTGCGTC TGCGCAACGC CACCACGCGC
AGCAACTTCG GCCCGGACCT GGACGAGAAC CGCTTCATCG TCAGCTACAG CCTGCCGCTC
TGGTAA
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| Protein sequence | MRLHHSSLCQ LLCGGAVLIA ASPASAAFVD DSKAVLDARN FYFNRDFRQS GAAQSKAEEW
AQGFMLRFES GYTEGPIGFG IDAIGLLGLK LDSSPDRIGT GLLKSDREAP RRAQDEYGEA
GFTAKLRASN STLKLGTLQP LLPALMRNDS RLLPQTFRGA WLSSNEIEGL SLDLGRLDRV
NQRDSSDNEE MAVFNGGRRN IVLGSTRTSD EFIFAGGRYQ WTPELATSYY YGGLDGIYKQ
HLVNLVHQLP LGEGQSFKSD IRYARSTDDG GSNVDNDAFG ALFTYRLGSH GFTAGYQHLS
GDTGFAYIAG ADNALINLVQ INDFGNQDER SWQLRYDFDF AALGVPGLSL MTRYLSGDNV
DRGAGQSEGK TWERNTDLAY VVQSGPLKNL GLRLRNATTR SNFGPDLDEN RFIVSYSLPL
W
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