Gene Pmen_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4348 
Symbol 
ID5107201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4764486 
End bp4765484 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content66% 
IMG OID640505614 
Productsulfate ABC transporter, ATPase subunit 
Protein accessionYP_001189827 
Protein GI146309362 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID[TIGR00968] sulfate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCG AAATTCGCAA CGTCAGCAAG AACTTCAATG CGTTCAAGGC GCTGAACGAC 
ATCAACCTGA ACATCCAGAG CGGCGAGCTG GTCGCCCTGC TCGGCCCGTC CGGCTGCGGC
AAGACCACCC TGCTGCGCAT CATCGCCGGC CTGGAAACCC CGGACAGCGG CACCATCGGC
TTCCACGGCG AGGACGTTTC CGAGCACGAC GTGCGCGATC GCAACGTCGG TTTCGTGTTC
CAGCACTACG CGCTGTTCCG CCACATGACG GTGTTCGACA ACGTCGCCTT CGGCCTGCGC
ATGAAGCCCA AGCGCGAGCG CCCGAGCGAG GACGTGATCA AGCAGAAGGT GCACGAGCTG
CTCGACCTGG TGCAGCTCGA CTGGCTCGGC GACCGCTACC CGGAGCAGCT CTCCGGCGGC
CAGCGCCAGC GTATCGCCCT GGCCCGCGCC CTGGCGGTGG AGCCCAAGGT GCTGCTGCTC
GACGAACCCT TCGGCGCGCT GGACGCCAAG GTGCGCAAGG AGCTGCGTCG CTGGCTGGCA
CGCCTGCACG ACGACGTGCA CCTGACCAGC GTGTTCGTCA CCCACGACCA GGAAGAAGCC
ATGGAAGTGG CCGACCGCAT CGTGGTGATG AACAAGGGCG TGATCGAACA GATCGGCACG
CCGGCCGAGG TCTACGAATA CCCGGCCAGC GACTTCGTCT ATCACTTCCT CGGCGATGCC
AACCGCCTCT ATGTCGGCGG TGGCGATCAT CACGTGCTGT TCCGCCCGCA CGAGGTCGAC
CTGTCGCTGC AGCCGGCGGC CGATCACCAG AGCGGCGAGG TGCGCGACAT CCGCCTGCTC
GGCGCCATCA CCCGCATCAC CCTCAAGGTT GAGGGCCAGG ACGAACTGAT CGAGGCCGAG
GTGGCCAAGG ATCACGTCAG CCTGGACAAC CTCGCCCGCG GCACCACCCT GTACTTCAAG
CCCAAGGGTG GCAAGCCGGT CGGCACACCG GCCAGCTGA
 
Protein sequence
MSIEIRNVSK NFNAFKALND INLNIQSGEL VALLGPSGCG KTTLLRIIAG LETPDSGTIG 
FHGEDVSEHD VRDRNVGFVF QHYALFRHMT VFDNVAFGLR MKPKRERPSE DVIKQKVHEL
LDLVQLDWLG DRYPEQLSGG QRQRIALARA LAVEPKVLLL DEPFGALDAK VRKELRRWLA
RLHDDVHLTS VFVTHDQEEA MEVADRIVVM NKGVIEQIGT PAEVYEYPAS DFVYHFLGDA
NRLYVGGGDH HVLFRPHEVD LSLQPAADHQ SGEVRDIRLL GAITRITLKV EGQDELIEAE
VAKDHVSLDN LARGTTLYFK PKGGKPVGTP AS