| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4333 |
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| Symbol | |
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| ID | 5107186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4749385 |
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| End bp | 4750377 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505599 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001189812 |
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| Protein GI | 146309347 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTA CGTGTCTGGA TCGAGATGCC GCCATGTCCA AGACCCATTC CAAGCGCAGC
ACACTGATTG CCGTGTCCCT GGCCATCGGC CTGCTCGCCG CGCCCATCGC CGACGCCGCC
CAGCAGCTGC GCATCGGCTA CCAGAAATCC TCCACGCTGA TCAGCCTGCT GAAGAGCCAG
GGCACCCTGG AAAAGGCCTT GGCCGACCAG GACATCACCA TCAGCTGGCA CGAATTCCCC
AACGGCCAGC CGCTGCTGGA AGCGCTCAAC GTCGGCAATA TCGACCTCTC CGCCGATGTC
GCCGATACCG TGCCGGTGTT CGCCCAGGCC GCCGGCGCCG ACCTCGCCTA CTTCGCCCAG
GAAGCGCCCT CTCCCAGCGC CCAGGCGATC ATCGTGCGCG AGGATTCACC GATCAAAACG
CTGGCCGACC TCAAGGGCAA AAAGGTCGCC GTGACCAAGG CGGCCGGCGT GCATTACCTG
CTGATAGCCG CACTGCAGCA GGCCGGCCTG AAATTCAGCG ACATCGAACC GGCCTACCTG
GCTCCGGCCG ACGGCCGCGC CGCCTTCGAG AACCGCAAGG TGGACGCCTG GGTCACCTGG
GAACCCTTCC TCAGCAGCGC CCAGCAGCAG TTGCCGACGC GCATACTCGC CGACGGCAAG
GGCCTGGCCG ACTACCAGCG CTACTACCTG ACCAGCGCCA CCTTCGCCAG GAACCATCCG
CAGGTGCTGC AGACCGTGTT CGACGAGCTG GTGAAGACCG GCGACTGGCT GCGCGCCAAC
CCGCGCCAGG CGGCTGAAAT CCTCGGTCCG CTGTGGGGCA ACCTCGCCCC GTCCATCGTC
GAGCAGGCCA ACGCCAAGCG CAGCTACCAG GTGCGCCTGG TGCAGCCGGA CAGCCTTGCC
GAGCAGCAGA AGATCGCCGA TGCCTTCTAC GGCGCCAGCC TGCTGCCGAC CTCGGTGGAT
GCCCGCGAAG TCAGCATCTG GAGCCCGCAA TGA
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| Protein sequence | MAGTCLDRDA AMSKTHSKRS TLIAVSLAIG LLAAPIADAA QQLRIGYQKS STLISLLKSQ
GTLEKALADQ DITISWHEFP NGQPLLEALN VGNIDLSADV ADTVPVFAQA AGADLAYFAQ
EAPSPSAQAI IVREDSPIKT LADLKGKKVA VTKAAGVHYL LIAALQQAGL KFSDIEPAYL
APADGRAAFE NRKVDAWVTW EPFLSSAQQQ LPTRILADGK GLADYQRYYL TSATFARNHP
QVLQTVFDEL VKTGDWLRAN PRQAAEILGP LWGNLAPSIV EQANAKRSYQ VRLVQPDSLA
EQQKIADAFY GASLLPTSVD AREVSIWSPQ
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