| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4332 |
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| Symbol | |
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| ID | 5107106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4747711 |
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| End bp | 4749030 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505598 |
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| Product | outer membrane porin |
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| Protein accession | YP_001189811 |
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| Protein GI | 146309346 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.994922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CCAATCTGGC GCTGGCCGTC GCCCTGGCCG CTCTGGCCAC CGAAGCGACT
GCCGCCGGTT TCATCGAAGA CAGCAAGGCC AGCATCGGCC TGCGCAATTT CTATTACGAC
CTCAACACCA AGAACACCGC CAACAACAAT GGCGAGGCGC AGGAGTGGGG GCAGGGCTTC
ATCTTCAACT ACAGCTCCGG TTTCACCGAA GGCACCGTCG GCTTCGGCCT CGACGCCATC
GGCCTGCTGG GCGTCAAGCT GGATTCCGGC GGCCGCAATA CCAAGACCGG GCGCGACCGC
ACTCCCGGCC AGCTGTTCCC GCTCGATAGC GACGGCAGCG CGGTGGACGA GTACAGCAAG
GCCGGCGTGA CCGCCAAGGT GCGCCTGTCC AAGACCGAGG CGCGCCTCGG CACCCTGCTG
CCAAAGCTGC CGGTGGTGAC CTTCAACGAC GGCCGCCTGC TGCCGCAGAC CTTCGAAGGC
GGGCAGATCA CCTCCAACGA GATCGACGGC CTGACCCTGA CCGCCGGCCA GCTGGAAAGC
ACCAAGACCC GCAGCTCCAC CGACGACATC GCCCTGCGTA TCGCCGGCGC CACCGGTGAC
GCCGACACCA ACAAGTTCTA CTTCGCCGGC GGCGACTACA AGCTGACCAA GGACCTGGCG
CTGCAGTACT ACTACGGCAA TCTGGAAGAC TTCTACAAAC AGCACTTCCT TGGCCTGGCG
CACAACTGGG CGATCGGCCC GGGTTCGCTG AAGACCGACC TGCGCTACTT CGACAGCGGT
TCCGACGGCA AGAACGGCAG CGCGGCCGGT CGCGCCCAGG GTTACCGCAG CGCCGGCTAC
TGGCGTGCCG GCGACAGCAG CACCGGCGAG GTCGACAACC AGACCTGGAG CGCGCTGTTC
ACCTACACCC TGGGCAGCCA CTTCGCCAGC CTGGGCTACC AGCAGGTCGA AGGCGACAGC
GCCTTCCCGT TCCTCAACCA GGGCGGCGGC TCCTCGTCCT ACCTGATCAC CGACCGCCAG
ATCGGCAAGT TCCAGAACGC CGGTGAGCGC ACCTGGGTGG CCGAGTACGG CTACGACTTC
GCCAAGCTCG GCGTGCCGGG CCTCAAGGCC AGCGTCGCCT ACCTCAAGGG CGACAACGTC
GATTCCGCCA ACGGTGACCT GAAGGAATGG GAGCGCGATT TCCGCCTCGA CTACACCCTG
CAGGACGGCC CGCTGAAAGG CCTGGGTGTG TCCTGGCGCA ACGCGACCCA GCGCGGCAAC
GTCACCACCG ATGCCGACGA GAACCGTTTG ATTTTGAGCT ACACCCTGAC GCTGCTCTGA
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| Protein sequence | MNKSNLALAV ALAALATEAT AAGFIEDSKA SIGLRNFYYD LNTKNTANNN GEAQEWGQGF
IFNYSSGFTE GTVGFGLDAI GLLGVKLDSG GRNTKTGRDR TPGQLFPLDS DGSAVDEYSK
AGVTAKVRLS KTEARLGTLL PKLPVVTFND GRLLPQTFEG GQITSNEIDG LTLTAGQLES
TKTRSSTDDI ALRIAGATGD ADTNKFYFAG GDYKLTKDLA LQYYYGNLED FYKQHFLGLA
HNWAIGPGSL KTDLRYFDSG SDGKNGSAAG RAQGYRSAGY WRAGDSSTGE VDNQTWSALF
TYTLGSHFAS LGYQQVEGDS AFPFLNQGGG SSSYLITDRQ IGKFQNAGER TWVAEYGYDF
AKLGVPGLKA SVAYLKGDNV DSANGDLKEW ERDFRLDYTL QDGPLKGLGV SWRNATQRGN
VTTDADENRL ILSYTLTLL
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