| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4323 |
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| Symbol | |
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| ID | 5107097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4737613 |
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| End bp | 4738593 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505589 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001189802 |
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| Protein GI | 146309337 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.174195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCCA ACACTTTGCG TCGGAGTCTG GTCGCCCTGT TTGCCGCGGC CATTTCCTTC
GGCGCCATCA CTCAAGCACA GGCCGCTTCT GATAACGAAA GCGTGTTGCG GATCGGCTAT
CAGAAGTACG GCACCCTGGT GCTGCTCAAA TCCAGCGGTG CGCTGGAAAA ACGCCTGGCC
GAACAGGGCG TCAAGGTGCA GTGGACCGAG TTCCCGGCGG GCCCGCAGCT GCTCGAAGGG
CTCAACGTGG GCTCCATCGA CTTCGGCACC ACGGGCGAGA CGCCGCCGGT ATTCGCCCAG
GCCGCCGGCG CCGATCTGCT CTACGTGGCC TTCGAGCCGC CGGCGCCGCT CAGCGAGGCG
ATACTGCTGC CCAAGGATTC GCCGATCAAA ACGGTGGCCG AACTCAAGGG CAAGAAGGTC
GCCCTGAACA AGGGTTCCAA CGTGCATTAC CTGCTGGTGC GCGCGCTGGA GGAAGCCGGC
CTGAGCATCA GCGATATCAC CCCCGTGTAC CTGCCGCCTG CCGATGCCCG CGCCGCGTTC
GAGCGTGGCA GCGTCGACGC CTGGGTGATC TGGGACCCCT TCCAGGCGGC CGCCGAACAG
CAGCTGCAGG CCCGTACCCT GCGCGACGGC CAGGGCCTGG TGAGCAACCA CCAGTTCTAC
CTGGCCGCGC GTCCCTTCGC CGAAAAGCAC CCCGAGGTAG TGGTCGCCCT GGTGGACGAG
ATTCGCAAGA CCGGCGAGTG GACCCGCGCC AACGTCGACG AAGCCACCGC CCAGGTTGCA
CCGCTGCTGG GTCTGTCGCC CGAGATCACC CGTACCGCGG TGCAGCGGCA GAGCTACGGC
GCGCAGCTGA TCACCCCGGA AGTGGTGAGT GCGCAGCAGA AGATCGCCGA CACCTTCAGC
GATCTGAAGC TGATCCCCAA GCGCCTGAGC ATTGCCGAGG TGATCTGGCG GCAGCCGGCC
AAGGTCGCCC AGGCCCAGTA A
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| Protein sequence | MGANTLRRSL VALFAAAISF GAITQAQAAS DNESVLRIGY QKYGTLVLLK SSGALEKRLA
EQGVKVQWTE FPAGPQLLEG LNVGSIDFGT TGETPPVFAQ AAGADLLYVA FEPPAPLSEA
ILLPKDSPIK TVAELKGKKV ALNKGSNVHY LLVRALEEAG LSISDITPVY LPPADARAAF
ERGSVDAWVI WDPFQAAAEQ QLQARTLRDG QGLVSNHQFY LAARPFAEKH PEVVVALVDE
IRKTGEWTRA NVDEATAQVA PLLGLSPEIT RTAVQRQSYG AQLITPEVVS AQQKIADTFS
DLKLIPKRLS IAEVIWRQPA KVAQAQ
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