Gene Pmen_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4302 
Symbol 
ID5107076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4709619 
End bp4710299 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID640505568 
Producthypothetical protein 
Protein accessionYP_001189781 
Protein GI146309316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAG CCATTGGCCG TCATGCTCTG GTGCTGCTGT TCGGTGTGCT TGGCGCCGCG 
AGCGGGCGCG CCGACGAGCT GTTCGAGGCG CTGGCCGGGC AGGCGCCCGA GCTTGAAGTG
CAGGCCCTGC GCCAGGCGCT CGGCGCCATG CGCTGTGCGC AGAGTCGGGG CGCCGGGGCC
GCCAGTCGGC TGGCGGTGAT CGATTACTCG CAGCCCTCCA GCGCGCGGCG CCTGTGGATC
TTCGACCTGC AGGGCAGGCG CCTGCTGCTG CGCGATCTGG TCGCCCATGG GCGTGGTTCC
GGCGAGGATG TCGCCGCGCT GTTTTCCAAC GAGCCGGGGA GCCACCAGAG CAGCCTCGGC
CTGTTTCGCA CCGCGGAAAG CTACAGCGGC AAGCACGGCT ACTCGCTGCG CATGGATGGC
CTGGAGCCCG GTCTCAACGA TCGGGCGCGC GAGCGCGCCA TCGTCATCCA TGGCGCCGAC
TACGTGAGCT CCGGCTGGCT GCAGGCGCAC GGCCGTCTGG GGCGCAGCCT GGGCTGTCCG
GCGGTCAGGC AGGAGGTGGC GCGAACGGTG GTCGATCAGC TGGCGGGCGG TCAGTTCCTC
TTCGCCTGGC ATTCCGACCC GCGCTGGCTG GATGCGTCCG CGCTGTCGCC GTGCCGCCAA
CTCGCCGCAG GGGCGCACTG A
 
Protein sequence
MFRAIGRHAL VLLFGVLGAA SGRADELFEA LAGQAPELEV QALRQALGAM RCAQSRGAGA 
ASRLAVIDYS QPSSARRLWI FDLQGRRLLL RDLVAHGRGS GEDVAALFSN EPGSHQSSLG
LFRTAESYSG KHGYSLRMDG LEPGLNDRAR ERAIVIHGAD YVSSGWLQAH GRLGRSLGCP
AVRQEVARTV VDQLAGGQFL FAWHSDPRWL DASALSPCRQ LAAGAH