| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4293 |
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| Symbol | |
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| ID | 5107067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4699443 |
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| End bp | 4701257 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505559 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001189772 |
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| Protein GI | 146309307 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.536405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGA TCCCCGCCAC GCCCCGACGC CTCCGCTGGC GCAGCCTTGT GCTGCTGGCG
CTGCTGCTCG CTCCGCTGCT GTGGCCGGTG CATTACCTGG CCGAGCGTTA TTACCGTGAG
GTGCTGATCG AGCAGAATCG GCAGACGCTG GACCTGTATG TCGCCAACCT GCTCGGCACG
CTGCGCCGCT ACGAGGTGCT GCCGCAGATC CTCGGCGACC TGCCCGGTCT GCGCGCCGCC
CTGCAGGCTC CGGAAGACCC CACCGTGCTG GACAACGCCA ACCGCCTGCT GGCCCGGGTG
AAGAGCCAGA CCGGCGCCGA CGTGATCTAC CTGATGAACC CGCGCGGCCT GACCCTGGCC
GCCTCCAACT GGGACAAGCC CGACAGCTTC GTCGCCGGCA ACTTCGCCTT CCGCCCCTAT
TTCCGCGAAG CCCTGGCCGG ACGCCTGGGA CGCTTCTTCG GCCTCGGCAC CACCTCCGGC
AAGCGCGGCT ACTACTTCGC CTACCCGGTG CGCGAAGGGG AACAGAACAT CGGCGCACTG
GTGGTCAAGG TCGACCTCGA CCACACCGAG ACCCTCTGGG GCAATACGCC CGAGCAGCTG
CTGGTCACCG ATACCAATGG CGTGGTGATT CTCACCTCGC GCCCGGACTG GCGCTTCCAC
GCCAGCCGCC CGCTCGATCG TGTCGAGCAG GCCGCCATCG CCGCCAACCA GCCTTATCCG
ACCCAGGCCC CGCCAGCGCT GAATCTCGAT CCGGACGCCT GGCTGACGCA AAGCCGCGCA
CTGGAAGAGA CCGGCTGGAC GGTGAGCATC CTTGCCCCGC GCGTGCTGCT CGACCGCCCG
GTACGCAGCG CCGTAGCGGT AGGCGCCGCG GCCCTGCTGG CCCTGCTGCT GTTGCTCGGT
CTGCTGATCC TGCGCCGCCG TCACTACCTC GAACGCATCG CCCTCGATGC CCGCGCCAAG
GCCGAACTGG AGCAGCGCGT GGCCGAACGC ACGCACGACT TGGAACTGCT CAACAGCCGA
CTGAAACAGG AAGTGCTGGA GCGCGAGCAG GCCCAGCAGG AACTGGTGCG CGCCCAGGAC
GAACTGGTCC AGGCCGGCAA GCTGTCGGCC CTCGGCACCA TGAGTGCGAG CATCAGTCAT
GAGCTCAACC AGCCGCTGGC CGCCATTCGC AGCTACGCCG AGAACGCCAG CACCCTGCTC
GACCACCAGC GCAACGACGA CGCCCGCGCC AATCTCAAGC TGATCAGCGA GCTGACCGAG
CGCATGGCCT CGATCATCGC TCACCTGCGC GCCTTCGCCC GCCGTGACCA GCACGCCCCG
GAGCGGGTCG CGCTGCAGCC GGCGCTGGAC GACGCCCTCG CCCTGCTCGC CAAACGCCGC
CGGGCCATGG ATGTGGAGCT GATCCGCGAC CTGCCGGACG CCACGCTCTG GGTCCAGGCC
GGCGAAACGC GCCTGCGCCA GGTGCTCGGC AACCTGCTCG GCAATGCCCT GGACGCGTTG
AGCGACAGGG CGCCACCGCG GCGCATCTGG ATCAGCGTGC AGCAACAGGA CCAGCACCTG
GAGCTGCTGC TGCGCGACAA TGGCGCGGGC TTCTCGGCCG AATCCCTGGC GCGCGCCCGC
GAACCCTTCT TCACCACCAA GACCAGCGCT CAGGGCCTGG GGCTCGGCCT GGCCATCTGC
GACAGCCTGA TCCGCGCCCT GGACGGCGAG CTGCTGCTGG CCAATCATCC GGCGGGCGGC
GCGCTGATCA CCCTGCGCCT GCGCCTGGCC AGCCCCGGCG TCAACCTGCA ACCTTCTGAG
GACCCTTCGC CATGA
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| Protein sequence | MSSIPATPRR LRWRSLVLLA LLLAPLLWPV HYLAERYYRE VLIEQNRQTL DLYVANLLGT
LRRYEVLPQI LGDLPGLRAA LQAPEDPTVL DNANRLLARV KSQTGADVIY LMNPRGLTLA
ASNWDKPDSF VAGNFAFRPY FREALAGRLG RFFGLGTTSG KRGYYFAYPV REGEQNIGAL
VVKVDLDHTE TLWGNTPEQL LVTDTNGVVI LTSRPDWRFH ASRPLDRVEQ AAIAANQPYP
TQAPPALNLD PDAWLTQSRA LEETGWTVSI LAPRVLLDRP VRSAVAVGAA ALLALLLLLG
LLILRRRHYL ERIALDARAK AELEQRVAER THDLELLNSR LKQEVLEREQ AQQELVRAQD
ELVQAGKLSA LGTMSASISH ELNQPLAAIR SYAENASTLL DHQRNDDARA NLKLISELTE
RMASIIAHLR AFARRDQHAP ERVALQPALD DALALLAKRR RAMDVELIRD LPDATLWVQA
GETRLRQVLG NLLGNALDAL SDRAPPRRIW ISVQQQDQHL ELLLRDNGAG FSAESLARAR
EPFFTTKTSA QGLGLGLAIC DSLIRALDGE LLLANHPAGG ALITLRLRLA SPGVNLQPSE
DPSP
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