| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4290 |
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| Symbol | |
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| ID | 5107064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4697113 |
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| End bp | 4697985 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505556 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001189769 |
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| Protein GI | 146309304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.314543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA TCATCCTCGC CGGCGGCTCC GGCACCCGGC TGCACCCCAT CACCCTCGGC
GTGTCCAAGC AACTGCTGCC GATCTACGAC AAGCCGATGA TCTATTACCC GCTGTCGGTC
CTGATGCTGG CCGGCATTCG CGAGATCCTG ATCATCTCCA CCCCGCAAGA TTTGCCCAAC
TTCCAGAAGA TGCTGGGCGA CGGCAGCCAG TTCGGCATCG ACCTGCAATA TGCCGAGCAA
CCCTCTCCCG ATGGTCTGGC TCAGGCCTTC CTGATCGGCG AGTCGTTCAT CGGCGACGAC
TCGGTATGCC TGATCCTCGG CGACAACATC TTCCACGGCC AACACTTCAC CGAGAAGTTG
CTACGTGCTG CCAGCCAGCC GAGCGGCGCC ACGGTATTCG GTTACTGGGT GAGCGATCCC
GAGCGCTTCG GGGTGGTGGA GTTCGATGCC GCCGGTAACG CATTGTCGAT CGAGGAGAAG
CCGGCCAATC CCAAATCCAG TTTTGCCGTG ACCGGGCTGT ACTTCTATGA CAACGACGTG
GTGCAGATCG CCAAGGACGT AAAACCGTCC GCCCGCGGCG AACTGGAAAT CACCGACGTC
AACAATGCCT ACCTGGCGCG CGGGAGCCTG CGTGTGGAGC GCTTCGGCCG CGGCTTCGCC
TGGCTCGACA CCGGTACCCA CGACAGCCTG CTCGAAGCCT CGCACTACGT GCAGACGGTG
GAAAAGCGTC AGGGCCTGAA GGTCGCCTGC CTGGAGGAAA TCGCCTATCA ACAGGGCTGG
ATCGATCGCG AAAAGCTGCT GTCCTGCGCC AAGGCGCTGG GCAAGACCGG CTACGGTCAG
TACCTGTACA AACTGGCGGA GGAGTCGTTG TGA
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| Protein sequence | MKGIILAGGS GTRLHPITLG VSKQLLPIYD KPMIYYPLSV LMLAGIREIL IISTPQDLPN
FQKMLGDGSQ FGIDLQYAEQ PSPDGLAQAF LIGESFIGDD SVCLILGDNI FHGQHFTEKL
LRAASQPSGA TVFGYWVSDP ERFGVVEFDA AGNALSIEEK PANPKSSFAV TGLYFYDNDV
VQIAKDVKPS ARGELEITDV NNAYLARGSL RVERFGRGFA WLDTGTHDSL LEASHYVQTV
EKRQGLKVAC LEEIAYQQGW IDREKLLSCA KALGKTGYGQ YLYKLAEESL
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