Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4286 |
Symbol | |
ID | 5107060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4691820 |
End bp | 4692731 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505552 |
Product | glycosyl transferase family protein |
Protein accession | YP_001189765 |
Protein GI | 146309300 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.131233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTG CCCTGATCAT TCCCACGCGC AATGCCGGTG CTCACCTCGA TCGCCTGCTG CCTGCGCTCG CCCGTCAGAC CTTGCAGCCC GACGAGTTTC TGGTGGTCGA CAGCAGTTCG CGCGACGACA GCGTGGCGCG TCTACGCGAC GCCGGTGCGC GGGTCGAAGT GATCGAACCG AGCCAGTTCA ACCATGGCGG TACGCGGCGC TGGGCCAGTC AGCAGGTTGC AGCGGATGTG CTGATCTACC TGACCCAGGA TGCCATTCCG GCAACGCCGG ACACCTTTGC CCGCATTGTC GGCGCCCTGC ATGGCGAGCC GGATATCGGC GTCGCCTATG GCCGTCAGCT GCCCCATGCG GATGCCGGTT TGCTGGGCGC GCAGGCGCGT CGTTTCAATT ATCCGCCGGT CAGCCGGACC AAGCGCCTTG TCGATGCAGG CGAACTGGGG ATCAAGACCT GCTTCAGTTC CGACTCCTTT TCGGTCTACC GACGTGATGC GCTGGAGGCG GTCGGCGGTT TTCCCGAGGA CGTGATCGGC AGCGAGGACG CCTATGTGGC GGCGCGCATG CTGCTGTCCG GTTATGCGGT GCGCTATGCG GCGGATGCCG AGGTGCATCA CTCGCATGAT TACCGTCTGC TAGAAGAGTT TCGTCGCTAC TTCGATATCG GTGTGTTCTA CGGGCGTGAA CGCTGGATCG GCGAGGCGTT CGGCGCGGCC AGCGGGGAGG GCCTTCGCTA CGTCAAGGCT GAGCTGCAGG CTGTGCTGGC TGCGGGCGCG CTCTGGCGCG TGCCGGAGGT GCTGCTGCGC ACCGCGGCGA AACTGCTTGG CTACAGGATT GGACAGGGCG AGCGCTATCT TGATGTTGGC TTGAAACGCC GCCTTAGCAT GTTTCCGGGG TACTGGAAGT GA
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Protein sequence | MSVALIIPTR NAGAHLDRLL PALARQTLQP DEFLVVDSSS RDDSVARLRD AGARVEVIEP SQFNHGGTRR WASQQVAADV LIYLTQDAIP ATPDTFARIV GALHGEPDIG VAYGRQLPHA DAGLLGAQAR RFNYPPVSRT KRLVDAGELG IKTCFSSDSF SVYRRDALEA VGGFPEDVIG SEDAYVAARM LLSGYAVRYA ADAEVHHSHD YRLLEEFRRY FDIGVFYGRE RWIGEAFGAA SGEGLRYVKA ELQAVLAAGA LWRVPEVLLR TAAKLLGYRI GQGERYLDVG LKRRLSMFPG YWK
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