Gene Pmen_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4279 
Symbol 
ID5107053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4682735 
End bp4684177 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content65% 
IMG OID640505545 
Producthypothetical protein 
Protein accessionYP_001189758 
Protein GI146309293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.95109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00017763 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATGC CGCTTGGCGT CCCTCTGGCA TTGCTCTGTG GTGGCCTTTT CGGCGCGCTG 
CTCTGGGTAC TGCCGGCCAG CAAACTGCTG GTGCTGCTGG CCGGCGCCGC GCTGGGGCTG
ACCATTCTGC GGCGGCCGTT ACTGGGCTTG CTGCTGTTCG CGGTGGTGGG CACGTTTTTG
CCATATTCGA CGGTCAGCCT GGGCATTCGC ACCACGGTGT CCGAGGCACT GCTGATGCTG
GTCTGGGTCG GCATCTGGTT CCAGACCCTG CTGGGTGGCC TGCCGCGTGC CCCCGAGTCC
CCCGGGCTTC CAGAGCGCCT GGCCGTGGCC CTGGCCGTGT ATAGCCTGTT TCCGTTGGTC
ATCGGGCAGG TCATGGTGGA CGCCGAAGGC AATGGGCCGA TCAACTGGAT ACGTTGGCTG
TTCAACCTGT CCGCGCTGTT TCTGGTGGGG CGGCTGTTGG CCGAACGGAA GGCTCGAGAG
CAGGTGGTCA TAGCGCTCTT GCTGGGCACC CTGTTCATGC TCTTGCTGTC GATCCCGACC
TTCCTGCGTG AGCGCTCGGC GACCAGCATG ACGCCCATCC TGGCGGCCCT TGGTTACGGC
TCGCTGGAGG TTCTCGGTGA CAGCCTGATG GCCCTCGCAC CGAGAATGGG CTCGCCCTGG
ATGCATCCCA ACGCCACGGG CGGGGCGCTG GCTCTCCTGC TTCCGCTGGC GCTCTGTTAC
GGCCTGGCTC GTCGTGGCTG GCCGCGAGCG CTCGGCTTGG CCGTCACCCT GCTCGGCAGC
ATGGGTTTGC TGCTCACCGG ATCGCGAGGC GCCTTGCTGA GCCTGGTGCT GATACTGGTC
TGGATGGCGG GGCGGCGCGT GCCCTATGCC GGTCGCCTGC TGTTGATCGG CAGCTTCCTG
GGCGTGTTGC TGACCTTGGC GTACCCGCCA TTGCAGGAGC GTCTGCTGAC CATGTTCCTG
ACCAGCAACG AGAGCACCTC GGTGCGATTC GACGAATACG CCAACTTCCC TGCTGCCATG
GCGGCTTACC CCTTCGGTGT GGGGTTCAAG GTCGATCCTC CGGTCCCGGG CAGCGGTCTA
TGGGGCATCT CCAATCTCTG GCTCAACTAC ATCTACAAGA TCGGCCTGCC CGGCATGCTG
CTGTTCATCG CGGTGACCTG GAGCTGGTGG CGGGTTGTCC GGCCGCGCTC CAGGGTCATC
CCGCTGACGG CCGACAACGC CATTTGGCTG GGTACGCTGG GCGGCCTGCT GGCGGCGCTG
CTGAGCGGTT TGTTTGACCA CTATTTCAGT TTCACCATGG TGCTGGTCGC ACTGTTCTGG
TTGTTCATGG GGCTCAATCT GCATGAAGCC CGGCGCTTGT ACGGGGCCGA GGCGCGGGGG
GCTGGCGTGG ATGAGGCAGG GCCGAATCAG GATTCCCCGG ATAAGCAATG GAGGCGGCGA
TGA
 
Protein sequence
MSMPLGVPLA LLCGGLFGAL LWVLPASKLL VLLAGAALGL TILRRPLLGL LLFAVVGTFL 
PYSTVSLGIR TTVSEALLML VWVGIWFQTL LGGLPRAPES PGLPERLAVA LAVYSLFPLV
IGQVMVDAEG NGPINWIRWL FNLSALFLVG RLLAERKARE QVVIALLLGT LFMLLLSIPT
FLRERSATSM TPILAALGYG SLEVLGDSLM ALAPRMGSPW MHPNATGGAL ALLLPLALCY
GLARRGWPRA LGLAVTLLGS MGLLLTGSRG ALLSLVLILV WMAGRRVPYA GRLLLIGSFL
GVLLTLAYPP LQERLLTMFL TSNESTSVRF DEYANFPAAM AAYPFGVGFK VDPPVPGSGL
WGISNLWLNY IYKIGLPGML LFIAVTWSWW RVVRPRSRVI PLTADNAIWL GTLGGLLAAL
LSGLFDHYFS FTMVLVALFW LFMGLNLHEA RRLYGAEARG AGVDEAGPNQ DSPDKQWRRR