Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4279 |
Symbol | |
ID | 5107053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4682735 |
End bp | 4684177 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505545 |
Product | hypothetical protein |
Protein accession | YP_001189758 |
Protein GI | 146309293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.95109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00017763 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATGC CGCTTGGCGT CCCTCTGGCA TTGCTCTGTG GTGGCCTTTT CGGCGCGCTG CTCTGGGTAC TGCCGGCCAG CAAACTGCTG GTGCTGCTGG CCGGCGCCGC GCTGGGGCTG ACCATTCTGC GGCGGCCGTT ACTGGGCTTG CTGCTGTTCG CGGTGGTGGG CACGTTTTTG CCATATTCGA CGGTCAGCCT GGGCATTCGC ACCACGGTGT CCGAGGCACT GCTGATGCTG GTCTGGGTCG GCATCTGGTT CCAGACCCTG CTGGGTGGCC TGCCGCGTGC CCCCGAGTCC CCCGGGCTTC CAGAGCGCCT GGCCGTGGCC CTGGCCGTGT ATAGCCTGTT TCCGTTGGTC ATCGGGCAGG TCATGGTGGA CGCCGAAGGC AATGGGCCGA TCAACTGGAT ACGTTGGCTG TTCAACCTGT CCGCGCTGTT TCTGGTGGGG CGGCTGTTGG CCGAACGGAA GGCTCGAGAG CAGGTGGTCA TAGCGCTCTT GCTGGGCACC CTGTTCATGC TCTTGCTGTC GATCCCGACC TTCCTGCGTG AGCGCTCGGC GACCAGCATG ACGCCCATCC TGGCGGCCCT TGGTTACGGC TCGCTGGAGG TTCTCGGTGA CAGCCTGATG GCCCTCGCAC CGAGAATGGG CTCGCCCTGG ATGCATCCCA ACGCCACGGG CGGGGCGCTG GCTCTCCTGC TTCCGCTGGC GCTCTGTTAC GGCCTGGCTC GTCGTGGCTG GCCGCGAGCG CTCGGCTTGG CCGTCACCCT GCTCGGCAGC ATGGGTTTGC TGCTCACCGG ATCGCGAGGC GCCTTGCTGA GCCTGGTGCT GATACTGGTC TGGATGGCGG GGCGGCGCGT GCCCTATGCC GGTCGCCTGC TGTTGATCGG CAGCTTCCTG GGCGTGTTGC TGACCTTGGC GTACCCGCCA TTGCAGGAGC GTCTGCTGAC CATGTTCCTG ACCAGCAACG AGAGCACCTC GGTGCGATTC GACGAATACG CCAACTTCCC TGCTGCCATG GCGGCTTACC CCTTCGGTGT GGGGTTCAAG GTCGATCCTC CGGTCCCGGG CAGCGGTCTA TGGGGCATCT CCAATCTCTG GCTCAACTAC ATCTACAAGA TCGGCCTGCC CGGCATGCTG CTGTTCATCG CGGTGACCTG GAGCTGGTGG CGGGTTGTCC GGCCGCGCTC CAGGGTCATC CCGCTGACGG CCGACAACGC CATTTGGCTG GGTACGCTGG GCGGCCTGCT GGCGGCGCTG CTGAGCGGTT TGTTTGACCA CTATTTCAGT TTCACCATGG TGCTGGTCGC ACTGTTCTGG TTGTTCATGG GGCTCAATCT GCATGAAGCC CGGCGCTTGT ACGGGGCCGA GGCGCGGGGG GCTGGCGTGG ATGAGGCAGG GCCGAATCAG GATTCCCCGG ATAAGCAATG GAGGCGGCGA TGA
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Protein sequence | MSMPLGVPLA LLCGGLFGAL LWVLPASKLL VLLAGAALGL TILRRPLLGL LLFAVVGTFL PYSTVSLGIR TTVSEALLML VWVGIWFQTL LGGLPRAPES PGLPERLAVA LAVYSLFPLV IGQVMVDAEG NGPINWIRWL FNLSALFLVG RLLAERKARE QVVIALLLGT LFMLLLSIPT FLRERSATSM TPILAALGYG SLEVLGDSLM ALAPRMGSPW MHPNATGGAL ALLLPLALCY GLARRGWPRA LGLAVTLLGS MGLLLTGSRG ALLSLVLILV WMAGRRVPYA GRLLLIGSFL GVLLTLAYPP LQERLLTMFL TSNESTSVRF DEYANFPAAM AAYPFGVGFK VDPPVPGSGL WGISNLWLNY IYKIGLPGML LFIAVTWSWW RVVRPRSRVI PLTADNAIWL GTLGGLLAAL LSGLFDHYFS FTMVLVALFW LFMGLNLHEA RRLYGAEARG AGVDEAGPNQ DSPDKQWRRR
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