| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4231 |
|---|
| Symbol | |
|---|
| ID | 5106655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4635803 |
|---|
| End bp | 4637194 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640505495 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001189710 |
|---|
| Protein GI | 146309245 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CTGCCCAGAT CGAAGAGCTG AAGACCCTGG TTGAACCCGG CAAGGTGCTG
ACCGATGCCG ATTCCCTGGA GGCCTACGGC AAGGACTGGA CCAAGCATTT CGCCCCGGCG
CCTTCGGCCA TCGTCTTCCC CAAGAGCATC GAGCAGGTGC AGGCCATCGT GCGCTGGGCC
AACGCGCATC GCATCGCCCT GGTGCCGTCC GGCGGCCGCA CCGGCCTGTC GGCTGCCGCA
GTCGCGGCCA ACGGCGAGGT GGTGGTGGCG TTCGACTACA TGAACCAGAT TCTCTCGTTC
AACGAGTACG ACCGCACCGC GGTGTGCCAG CCGGGCGTGG TGACCAAGCA GCTGCAGCTG
TTCGCCGAGG ACAAGGGGCT GTACTACCCG GTGGACTTCG CCTCCTCCGG CTCCAGCCAG
ATTGGCGGCA ATATCGGCAC CAATGCCGGC GGGATCAAGG TGATTCGCTA CGGCATGACC
CGCAACTGGG TGGCCGGCCT GAAGGTGGTC ACCGGCACCG GCGAGCTGCT GGAGCTGAAC
CGCGACCTGA TCAAGAACGC CACCGGCTAC GACCTGCGCC AGCTGTTTAT CGGCGCCGAA
GGGACGTTGG GCTTCGTGGT CGAGGCCACC ATGCGCCTGG ATCGCGCGCC GAAGAACCTC
ACCGCGATGG TCCTCGGCAC CCCCGATTTC GACTCGATCA TGCCGGTGCT GCATGCCTTC
CAGGGCAAGC TCGACCTGAC CGCCTTCGAG TTCTTCTCCG ACAAGGCCCT GGCCAAGGTG
CTCGGCCGTG GCGACGTGCC GGCCCCCTTC GAGAGCGAGT GCCCGTTCTA CGCCCTGCTG
GAATTCGAGG CGACCACCGA GGAGGTGGCC AACCAGGCGC TGGAAACCTT CGAGCACTGC
GTCGAGCAGG GTTGGGTGGT CGACGGCGTG ATGAGTCAGA GCGAGCAGCA ACTGCAGAAT
CTGTGGAAGC TGCGCGAGTA CATCTCCGAG ACCATCAGCC ACTGGACGCC GTACAAGAAC
GACATCTCGG TCACCGTCAG CCAGGTGCCG GCCTTCCTCA AGGACATCGA CGCCATCGTC
GAGGCCAACT ACCCGGACTT CGAAGTGGTG TGGTTCGGCC ATATCGGCGA CGGCAACCTG
CACCTGAACA TCTTGAAGCC CGAGAACCTG AGCAAGGACG AGTTCTTCGC CAAGTGCGCG
GTGGTCAACA AGTGGGTGTT CGAGACCGTG CAGAAGTACA ACGGCTCGAT CAGCGCCGAG
CACGGCGTGG GCATGACCAA GCGCGACTAC CTGCACTACA GCCGCAGCGA GGCGGAGATC
GCCTGCATGA AGGCGGTCAA GGCGGTGTTC GACCCCAACG GCATCATGAA CCCCGGCAAG
ATCTTCGCAT AA
|
|---|
| Protein sequence | MTTPAQIEEL KTLVEPGKVL TDADSLEAYG KDWTKHFAPA PSAIVFPKSI EQVQAIVRWA
NAHRIALVPS GGRTGLSAAA VAANGEVVVA FDYMNQILSF NEYDRTAVCQ PGVVTKQLQL
FAEDKGLYYP VDFASSGSSQ IGGNIGTNAG GIKVIRYGMT RNWVAGLKVV TGTGELLELN
RDLIKNATGY DLRQLFIGAE GTLGFVVEAT MRLDRAPKNL TAMVLGTPDF DSIMPVLHAF
QGKLDLTAFE FFSDKALAKV LGRGDVPAPF ESECPFYALL EFEATTEEVA NQALETFEHC
VEQGWVVDGV MSQSEQQLQN LWKLREYISE TISHWTPYKN DISVTVSQVP AFLKDIDAIV
EANYPDFEVV WFGHIGDGNL HLNILKPENL SKDEFFAKCA VVNKWVFETV QKYNGSISAE
HGVGMTKRDY LHYSRSEAEI ACMKAVKAVF DPNGIMNPGK IFA
|
|---|
| |