Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4230 |
Symbol | |
ID | 5106654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4635025 |
End bp | 4635723 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505494 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001189709 |
Protein GI | 146309244 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAA TACGAACAAC ACAGGAGTCG GTGATGAGCT ATCAGCACCA GTACGTCGAC GGAACCACCG TCCACTTTCC CCTTGGCAAG GTCGTTTGCA TCGGCCGCAA CTATGCCGAG CATGCCGCCG AGCTGAACAA CCCGGTGCCC AGCGAACCCT TGCTGTTCAT CAAGCCGGGC TCCTGTGTGG TGCCGCTGGA CGGCGGTTTC AGCATCCCCG AGGATCGTGG CTCGGTGCAT TACGAGGCGG AAATCGCCGT GCTGATCGGC AAGCCGCTGT CATCGAGGCC GGATGCCGAG GAAGTGCGTG ACGCCATCAG TGGCTTCGCC CCGGCCCTGG ACCTGACCCT GCGCGACGTG CAGGCCAAGC TCAAGGAAAA GGGCTACCCC TGGGAAATCG CCAAGAGCTT CGACGGCGCC TGCGTGCTGG CGCGCTTCGT GCCCGGCGAT GCCATCGAGG ACCTGGCCGA TATCGGCATC CGCCTGAGCA TCAATGGCGA AACCCGCCAG GACGGCAACA GCCGCGACAT GCTCAACCCC ATCGTCGCGA TGATCCAGCA TATGGCCGGG CACTTCGCCC TGCAGCCGGG CGACGTGATC CTCACTGGCA CGCCGGTGGG CGTCGGCGCG CTGAACCGCG GCGACGAGCT GGTGCTGGAG CTGGTCGGTC ACAGTAGTTT CACCAGCCGC GTGTTATAA
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Protein sequence | MTTIRTTQES VMSYQHQYVD GTTVHFPLGK VVCIGRNYAE HAAELNNPVP SEPLLFIKPG SCVVPLDGGF SIPEDRGSVH YEAEIAVLIG KPLSSRPDAE EVRDAISGFA PALDLTLRDV QAKLKEKGYP WEIAKSFDGA CVLARFVPGD AIEDLADIGI RLSINGETRQ DGNSRDMLNP IVAMIQHMAG HFALQPGDVI LTGTPVGVGA LNRGDELVLE LVGHSSFTSR VL
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