Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4225 |
Symbol | |
ID | 5106649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4629853 |
End bp | 4632057 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640505489 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001189704 |
Protein GI | 146309239 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGTT GCTGCGACCA TTCGCACGAA CCCGTTGCCG GGGGCGGGCA GCCCGTCGGG CATGAGCACC ACGCTGCTCC CCAGCTGCAG TCTGACGAGG CGCTGGGCGG TGCGTTCACC ACGCGCATCC GCATCGAGCA GATGGACTGT CCGACCGAGG AGCGGCTGCT CCGCGATGCC CTGGGCAAGC TGCCGGGCGT CGCCGCCCTG CATTTCAATC TGCTGCAGCG CGTGCTCACC GTCGGCCATG ACGAAGGCGC GCTGACGCGC GTGCTGTCGG CGATCCGGGC GCTGGGGTTC ACCCCGCAGG TGGAAGGGCA GGCTGGGGCG CCTGCGCCCG CCGTAGCGCC TGCGCACAAA CCCTGGTGGC CGCTGGCGCT GGCCGGCGTG CTGGCCACGG CCTCGGAGCT GGTGCATTTC GCGGCTCTCG GTCCCGACTG GCTGGTGGCG CTGCTCGCCG TGATGGCCAT CGCCATCTGC GGGCCGAGCA CCTACAGAAA AGGCTGGGTC GCCCTGAAGA ACCGCAACCT CAACATCAAT GCGCTGATGA GCATCGCCGT GACCGGCGCG GTGCTGACCG GCCAGTGGCC GGAAGCGGCG ATGGTGATGG TGCTTTTCAC CCTGGCCGAG CTGATCGAGG CGCGTTCGCT GCAGCGGGCG CGCAACGCCA TTGCCAGTCT GATGGACCTG GCACCGCCGC GCGCCACGCG GCGCCAGGCC GATGGCAGCT GGCAGGAGGT GGACGTGCAG GCGGTGGCGG TCGGCGATGT GCTGCGGGTG CGGCCGGGCG AACGCATCGG CCTGGATGGC GAGGTGATCG CCGGTGCCTC GACGGTCAAC CAGGCGCCGA TCACCGGTGA GAGCCTGCCG CTGGACAAGG GCGTCGGTGA CACGCTGTTC GCCGGCACCA TCAACCAGGC GGGGTCGCTG GAATACCGGG TGACGGCGGC GGCGCGCGAC ACCACGCTGG CGCGCATCAT CCATGCGGTG GAGGAGGCGC AGGGCTCGCG CGCGCCGACC CAGCGCTTCG TCGATCGCTT CTCGCGCATC TATACCCCCA CGGTGTTCGC CTTCGCCCTG GCGGTCGCCG TGCTGCCGCC GCTGTTGGCG GGCGGCGCCT GGCTCGACTG GATCTACCGC GCGCTGGTGC TGCTGGTGGT GGCCTGCCCC TGCGCGCTGG TGATTTCCAC GCCGGTGACC ATCGTCAGCG GCCTGGCCGC GGCGGCGCGC AAGGGCATCC TGATCAAGGG CGGCGTGTAC CTGGAAAGCG GTCGACACCT GGCGCTGCTG GCGCTGGACA AGACCGGCAC CCTGACCCAT GGCAAACCGG TGCAGACCGA CTGCCTGAGC CTGGGCGATG GCGATACGCA GCAGCTCGCG CTGTGGGCTG CCAGCCTGGC GGCGCGTTCC GATCACCCGG TTTCCCAGGC GCTGGCCCGT GCCCTGGAGG GCCAGGCGCT GGCTGAAGTG GAGGCGTTCG AGGCGTTGCC GGGGCGCGGC ACCCGCGGCC GTATCGACGG GCGCCTGCTG CACCTGGGCA ATCACCGCCT GGTCGAGGAA CTCGGGCTGT GCTCGCCGGC ACTGGAGCAG CGCCTGGAGG CGTTGGAGCG GCAGGGCAAG AGTGTGGTGC TGCTGTGCGA CGAGCAGCGT GCGCTGATGC TCTTCGCCGT GGCCGACACG CTACGCCAGA GCAGCCGCGA GGCGGTGCAG CAGTTGCACG CGCTGGGCGT GCGCACCTGC ATGCTCAGCG GCGACAACGC CCACACCGTG GCGGCCATCG CCGAACAGGT CGGCATCGAC GAGGCGCGCG GCGACCTGCT GCCGGCGGAC AAGCTGGCCT GGGTCGAGAC GCGTCAGGCA CAGGGGCGGG TGGTCGGCAT GGTCGGCGAT GGCATCAACG ACGCACCGGC GCTGGCCAAG GCGCAGATCG GCTTCGCCAT GGGCGCTGCC GGCACCGACA CGGCCATCGA GACGGCGGAT GTTGCGCTGA TGGATGACGA CCTGCGCAAG ATCCCCGCCT TCGTCCGCCT GTCCCGCCAG ACCCACGCCA TTCTCGTGCA GAACATCGTG CTGGCGCTGG GCATCAAGGC GATCTTCCTG GCCCTGACCC TGGCTGGCGA GGCGACAATG TGGATGGCCG TGTTCGCCGA CATGGGCGTG AGCCTTCTGG TGGTGTTCAA CGGCCTGCGC CTGCTGCGCA AGTGA
|
Protein sequence | MSRCCDHSHE PVAGGGQPVG HEHHAAPQLQ SDEALGGAFT TRIRIEQMDC PTEERLLRDA LGKLPGVAAL HFNLLQRVLT VGHDEGALTR VLSAIRALGF TPQVEGQAGA PAPAVAPAHK PWWPLALAGV LATASELVHF AALGPDWLVA LLAVMAIAIC GPSTYRKGWV ALKNRNLNIN ALMSIAVTGA VLTGQWPEAA MVMVLFTLAE LIEARSLQRA RNAIASLMDL APPRATRRQA DGSWQEVDVQ AVAVGDVLRV RPGERIGLDG EVIAGASTVN QAPITGESLP LDKGVGDTLF AGTINQAGSL EYRVTAAARD TTLARIIHAV EEAQGSRAPT QRFVDRFSRI YTPTVFAFAL AVAVLPPLLA GGAWLDWIYR ALVLLVVACP CALVISTPVT IVSGLAAAAR KGILIKGGVY LESGRHLALL ALDKTGTLTH GKPVQTDCLS LGDGDTQQLA LWAASLAARS DHPVSQALAR ALEGQALAEV EAFEALPGRG TRGRIDGRLL HLGNHRLVEE LGLCSPALEQ RLEALERQGK SVVLLCDEQR ALMLFAVADT LRQSSREAVQ QLHALGVRTC MLSGDNAHTV AAIAEQVGID EARGDLLPAD KLAWVETRQA QGRVVGMVGD GINDAPALAK AQIGFAMGAA GTDTAIETAD VALMDDDLRK IPAFVRLSRQ THAILVQNIV LALGIKAIFL ALTLAGEATM WMAVFADMGV SLLVVFNGLR LLRK
|
| |