Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4193 |
Symbol | |
ID | 5106617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4595199 |
End bp | 4596857 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505457 |
Product | gamma-glutamyltransferase |
Protein accession | YP_001189672 |
Protein GI | 146309207 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCA AACTCCTGCT ATCGACCCTT CTGCTCGGCG CCAGCCTGCT GGCCCATGCC GCACCTCAAC AACCCGCCAT TGCCACCGCT CACCCCGCCG CCACTGCCGC CGCGCAGCAG ATGCTCGACG CCGGCGGCAA TGCCTTCGAC GCCGCCGTCG CCGCCAGCGC GGCCCTGGCC GTGGTCGAGC CTTACGGCTC GGGCCTGGGT GGCGGTGGCT TCTTCCTCCT GCGCAGTGGC GGTGACACGC CTGTCTACGA TTTTCTCGAC GCCCGCGAGC GTGCGCCGCT GGAAGCCAAG CCGGATCTCT ACGTACGTGA CGGCAAGGTG CAGCGCGAGC TGTCGCTCAA TGGCGCGCTG GCCGCTGCCA TTCCGGGGCT GCCGGCAGCA TTGGTCGAAC TGGCCGAGAA GCACGGTCGC CTGCCGCTGA AAAGCAGCCT GGCACCGGCG ATTCGCCTGG CCAACGAGGG CTTCGCGGTC GATCGCGTCT ACCGCGAGCG GGCGACCTGG CGCCTGGCGG CGCTGCGCGA CGACGCCGAA AGCGCCCGCC TATTCCTCGA CCAGGGCGAG GTGCCGGCAG AAGGTTACCG GCTGCGCCAG CCGGAGCTGG CGACCACCTT GCAGGCGCTG GCCGACCACG GCCGCGCCGG GTTCTATGGC GGCGAGCTGG GCAAGCGCCT GATCGCCGGC GTACGCAAGG CAGGCGGCAT CTGGAACGAG GACGATCTGG CGGAATATCG CGTACAACGG CGCGCGCCGC TGCGTTTCGC CCTCGAAGAC GGCCGCGAGC TGATCAGCGC CCCACCACCT TCGGCCGGCG GCATCGCGCT GGCGCAGAGC CTGGCGATCC TGCAGCAGCT GCCCTGGCGC GAGGCCGAGC CGGTGCAGCG CGTGCACTAC GTGGTCGAGG CGCTACGTCG TGCCTACCGT GACCGCGGCC TGCTCGGCGA CCCGGACTTC GTCAAGAACC CGGTCGAGCA ACTGCTTTCG CCGGGGCATC TGGCGGTACT GGCCGGCAGC ATCGACCCCG AGCGCGCCAC CCCCAGCGCC AGCCTGCAGC CTGCCGGCAC CTGGCATGAG GGCGACCACA CCACGCACTT CGCCGTGCTC GACACCGAAG GCAACGCGGT GGCCGCCACC CTGTCGATCA ATCTGCCCTT CGGCGCCGCC TTTACCGTGC CCGGCACCGG CGTGCTGCTC AACGACGAGA TGGACGATTT CGCTGCCGAC GTGCAGGGCG CCAATGCCTA CGGCCTGACC GGCAGCCAGG CCAACACCAT CGCAGGCGGC AAGCGCCCGC TGTCATCGAT GAGCCCGAGC TTTATCGAAA GCGTGGATGA GTTCGCCGCC TTCGGCACAC CGGGCGGCAG CCGCATCCCC AGCATGGTGC TGCTGTCGAT GCTGGAGTAC CTGGACGAGC AGCCCATCGC ACGCTGGCCG GCCGTGGCGC GCTATCACCA CCAGTTCCTG CCGGATGTGA TCGAGCACGA GCCGGACACC TTCAGCGACG CGCAGATCGC CGAGCTGGAG AAACGCGGCC ATGAACTCAA GCGCCTGGAC CGGCAGTACG GCAATCAGCA GGTGCTGCTG TGGGACAAGG CCAGCGGCGA GGTGCAGGCG GCGAGTGATC CGCGCGGGAT CGGCACAGTG ACACCTTGA
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Protein sequence | MLRKLLLSTL LLGASLLAHA APQQPAIATA HPAATAAAQQ MLDAGGNAFD AAVAASAALA VVEPYGSGLG GGGFFLLRSG GDTPVYDFLD ARERAPLEAK PDLYVRDGKV QRELSLNGAL AAAIPGLPAA LVELAEKHGR LPLKSSLAPA IRLANEGFAV DRVYRERATW RLAALRDDAE SARLFLDQGE VPAEGYRLRQ PELATTLQAL ADHGRAGFYG GELGKRLIAG VRKAGGIWNE DDLAEYRVQR RAPLRFALED GRELISAPPP SAGGIALAQS LAILQQLPWR EAEPVQRVHY VVEALRRAYR DRGLLGDPDF VKNPVEQLLS PGHLAVLAGS IDPERATPSA SLQPAGTWHE GDHTTHFAVL DTEGNAVAAT LSINLPFGAA FTVPGTGVLL NDEMDDFAAD VQGANAYGLT GSQANTIAGG KRPLSSMSPS FIESVDEFAA FGTPGGSRIP SMVLLSMLEY LDEQPIARWP AVARYHHQFL PDVIEHEPDT FSDAQIAELE KRGHELKRLD RQYGNQQVLL WDKASGEVQA ASDPRGIGTV TP
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