| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4174 |
|---|
| Symbol | |
|---|
| ID | 5105693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4576864 |
|---|
| End bp | 4577532 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640505438 |
|---|
| Product | cell division ATP-binding protein FtsE |
|---|
| Protein accession | YP_001189653 |
|---|
| Protein GI | 146309188 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2884] Predicted ATPase involved in cell division |
|---|
| TIGRFAM ID | [TIGR00960] Type II (General) Secretory Pathway (IISP) Family protein
[TIGR02673] cell division ATP-binding protein FtsE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00105133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAT TCGAGCAGGT CGCCAAGCGG TATCCCAATG GCCATGTCGG GCTGCACGAG
CTGAGCTTCC GCGTTCGCCC CGGCGAATTT CTCTTCGTCA CCGGCCACTC CGGTGCCGGC
AAGAGCACCC TGTTGCGCCT GCTGCTGGCG ATGGAGCGTC CTACCAGCGG CAAGCTGCTG
CTGGCCGGGC AGGACCTGTC GACCATCACC AACGCGCAGA TTCCCTTCCT GCGCCGGCAG
ATCGGCGTGG TGTTCCAGAA TCACCAGCTG CTGTTCGACC GCAGCGTGTA TGACAACGTC
GCCCTGCCGC TGCAGATTCT CGGTCTGTCC AAGCCGGAGA TCGCCAAGCG CGTCGGCGCC
GCGCTGGAGC GGGTCAGCCT CAGCGACAAG GCCGCGCAAG CGCCGGGTGA TCTGTCCACC
GGTCAGCAGC AGCGTGTCGG CATCGCCCGC GCCATCGTCC ACCGTCCAGC CCTGCTGCTG
GCGGACGAGC CCACCGGTAA CCTCGACCCG CGCCTGGCTG CCGAGATCAT GGGCGTGTTC
GAGGACATCA ACCAGCTCGG CACCACGGTG CTGATCGCCA GTCACGACCT GGCGCTGATC
GCCCGCATGC GCCACCGCAT GCTCACTCTG CAACGTGGCC GTCTGATCGG TGACGGGGAG
GCTGCCTGA
|
|---|
| Protein sequence | MIRFEQVAKR YPNGHVGLHE LSFRVRPGEF LFVTGHSGAG KSTLLRLLLA MERPTSGKLL
LAGQDLSTIT NAQIPFLRRQ IGVVFQNHQL LFDRSVYDNV ALPLQILGLS KPEIAKRVGA
ALERVSLSDK AAQAPGDLST GQQQRVGIAR AIVHRPALLL ADEPTGNLDP RLAAEIMGVF
EDINQLGTTV LIASHDLALI ARMRHRMLTL QRGRLIGDGE AA
|
|---|
| |