Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4167 |
Symbol | thiG |
ID | 5105686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4571629 |
End bp | 4572423 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505431 |
Product | thiazole synthase |
Protein accession | YP_001189646 |
Protein GI | 146309181 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.64186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG TTCGCAGCGA CAAGCCCTTC ACCCTGGCCG GTCGTACTTA CCAGTCGCGC CTGCTGGTGG GTACCGGCAA GTACAAGGAT ATGGACGAGA CCCGCGACGC CATCGCCGCC TCTGGCGCCG AGATCGTCAC CGTGGCGGTG CGCCGCACCA ATATCGGCCA GAACCCGGGC GAGCCGAACC TGCTCGATGT GATCAGCCCC GAGCAGTACA CCATCCTGCC CAACACTGCC GGCTGCTACG ACGCTGCAGA AGCGGTGCGC ACCTGCCGCC TGGCCCGTGA ACTGCTCGAC GGGCACAAGC TGGTCAAGCT GGAAGTGCTG GCCGACCAGA AGACTCTGTT CCCCAACGTG ATCGAGACCA TCAAGGCCGC CGAGATCCTG GTCAAGGACG GTTTCGACGT GATGGTGTAC ACCAGCGACG ATCCGATCAT CGCCCGCCAG CTGGCCGAGA TCGGCTGTAT CGCGGTGATG CCGCTGGCCG GCCTGATCGG CTCGGGCCTG GGCATCTGCA ACCCCTACAA CCTGCGCATC ATCCTCGAAG AAGCCAAGGT GCCGGTGCTG GTCGATGCCG GCGTGGGCAC GGCCTCCGAC GCCACCATCG CCATGGAGTT GGGCTGCGAG GCGGTGCTGC TCAACAGCGC CATCGCCCAT GCGCAGGACC CGATTCTCAT GGCGCGCGCC ATGAAGCACG CGGTCGAGGC CGGACGTCTG GCCTACCTGG CCGGCCGCAT GCCGAAGAAA CTCTATGCCA GCGCCTCGTC GCCGCTGGAT GGCCTGATCA AATAA
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Protein sequence | MSQVRSDKPF TLAGRTYQSR LLVGTGKYKD MDETRDAIAA SGAEIVTVAV RRTNIGQNPG EPNLLDVISP EQYTILPNTA GCYDAAEAVR TCRLARELLD GHKLVKLEVL ADQKTLFPNV IETIKAAEIL VKDGFDVMVY TSDDPIIARQ LAEIGCIAVM PLAGLIGSGL GICNPYNLRI ILEEAKVPVL VDAGVGTASD ATIAMELGCE AVLLNSAIAH AQDPILMARA MKHAVEAGRL AYLAGRMPKK LYASASSPLD GLIK
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