Gene Pmen_4167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4167 
SymbolthiG 
ID5105686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4571629 
End bp4572423 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID640505431 
Productthiazole synthase 
Protein accessionYP_001189646 
Protein GI146309181 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.64186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG TTCGCAGCGA CAAGCCCTTC ACCCTGGCCG GTCGTACTTA CCAGTCGCGC 
CTGCTGGTGG GTACCGGCAA GTACAAGGAT ATGGACGAGA CCCGCGACGC CATCGCCGCC
TCTGGCGCCG AGATCGTCAC CGTGGCGGTG CGCCGCACCA ATATCGGCCA GAACCCGGGC
GAGCCGAACC TGCTCGATGT GATCAGCCCC GAGCAGTACA CCATCCTGCC CAACACTGCC
GGCTGCTACG ACGCTGCAGA AGCGGTGCGC ACCTGCCGCC TGGCCCGTGA ACTGCTCGAC
GGGCACAAGC TGGTCAAGCT GGAAGTGCTG GCCGACCAGA AGACTCTGTT CCCCAACGTG
ATCGAGACCA TCAAGGCCGC CGAGATCCTG GTCAAGGACG GTTTCGACGT GATGGTGTAC
ACCAGCGACG ATCCGATCAT CGCCCGCCAG CTGGCCGAGA TCGGCTGTAT CGCGGTGATG
CCGCTGGCCG GCCTGATCGG CTCGGGCCTG GGCATCTGCA ACCCCTACAA CCTGCGCATC
ATCCTCGAAG AAGCCAAGGT GCCGGTGCTG GTCGATGCCG GCGTGGGCAC GGCCTCCGAC
GCCACCATCG CCATGGAGTT GGGCTGCGAG GCGGTGCTGC TCAACAGCGC CATCGCCCAT
GCGCAGGACC CGATTCTCAT GGCGCGCGCC ATGAAGCACG CGGTCGAGGC CGGACGTCTG
GCCTACCTGG CCGGCCGCAT GCCGAAGAAA CTCTATGCCA GCGCCTCGTC GCCGCTGGAT
GGCCTGATCA AATAA
 
Protein sequence
MSQVRSDKPF TLAGRTYQSR LLVGTGKYKD MDETRDAIAA SGAEIVTVAV RRTNIGQNPG 
EPNLLDVISP EQYTILPNTA GCYDAAEAVR TCRLARELLD GHKLVKLEVL ADQKTLFPNV
IETIKAAEIL VKDGFDVMVY TSDDPIIARQ LAEIGCIAVM PLAGLIGSGL GICNPYNLRI
ILEEAKVPVL VDAGVGTASD ATIAMELGCE AVLLNSAIAH AQDPILMARA MKHAVEAGRL
AYLAGRMPKK LYASASSPLD GLIK