Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4166 |
Symbol | trmB |
ID | 5105685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4570844 |
End bp | 4571560 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505430 |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_001189645 |
Protein GI | 146309180 |
COG category | [R] General function prediction only |
COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.533866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CCCAACAGCC CGAACTGACC GAAGACGGCC GCCAGCGCCG CACCATCAAG AGCTTCGTGA TGCGTGCCGG ACGCATGACC GAGGGCCAGC AGCGTGGCCT GGACAAGGGC TGGCCGCTGT TCGGCCTGGA GCTGGAAGAC GGCCTGCGCG ACTTCGACCA GGTATTCGGG CGCAGCGCGC CGCGCACCTT CGAGATCGGC TTCGGCATGG GCCATTCCAC CCTGGAGATG GCCGCTGCCG CGCCCGAGCA GGACTTCATC GGTGTCGAGG TGCACAAGCC CGGTGTCGGC GCGCTGCTCA ATGGCGTGAT GGCGCACAAC CTGAGCAACG TGCGTGTCTA CAGCTGCGAC GCCCTGGAAG TGCTGCAGGG TTGCGTGGCC GATGCCAGCC TCGATCGCGT GCTGCTGTTC TTCCCCGATC CCTGGCACAA GTCGCGTCAT CACAAGCGCC GCATCGTCCA GCCGGCCTTC GCCGAGCTGG TGCGCCGCAA GCTGAAGATC GGCGGCGTGC TGCACATGGC CACCGACTGG GAGAACTACG CCGAGCACAT GCTCGAGGTG ATGAACGCTG CACCGGGCTA CCGCAACCTG GCTGCCGACG GCACCTACGT GCCGCGCCCC GAGGAGCGTC CGGTGACCAA GTTCGAGCGC CGTGGCGAAC GCCTCGGTCA CGGCGTATGG GACCTGAAGT TCCAGCGCCA GGAGTGA
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Protein sequence | MTDTQQPELT EDGRQRRTIK SFVMRAGRMT EGQQRGLDKG WPLFGLELED GLRDFDQVFG RSAPRTFEIG FGMGHSTLEM AAAAPEQDFI GVEVHKPGVG ALLNGVMAHN LSNVRVYSCD ALEVLQGCVA DASLDRVLLF FPDPWHKSRH HKRRIVQPAF AELVRRKLKI GGVLHMATDW ENYAEHMLEV MNAAPGYRNL AADGTYVPRP EERPVTKFER RGERLGHGVW DLKFQRQE
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