| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4162 |
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| Symbol | |
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| ID | 5105681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4566205 |
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| End bp | 4567995 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505426 |
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| Product | carbohydrate-binding CenC domain-containing protein |
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| Protein accession | YP_001189641 |
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| Protein GI | 146309176 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACG TGCAATGGTT ATCCGCCCTG GCACTGGCGC TGGCCGCCCA CCACGCCCAG
GCCAACCCCG AGACCGTCGA TATCATGGTG CTCTACACCA AGGACGCCCA GGCGCTGCCC
AACGGCCGCG ACATCGACGC ACGCATCGCC AGCTACATCG AGTACACCAA CAACGCCTAC
GCCAAGAGCG GGGTCAACCT GCGCCTGCGC CTGGTGCACA AGCAGCTGCT GGACTGGGCC
GACTACTACG ACGTGTCCTC GGCCAACCTC AACAAGTTCA CCTACGACAC CCGCGTGCAG
CGTCTGCGCG AGCAGTACGG CGCGGACCTG GTGCAACTGA TCAACCGCAC CACCCAGGGG
CAGGGCTACG GCGTCTGCGG CATCGCCTGG ATGGGCACCG GGCCGAAGAA CAGCGACCGC
TTCAACAGCG GCGCCAAGGA GATGGCCTAC GGTCTGACCG GGGTCGACTG CAGCCTCAGC
ACCTTCGCTC ACGAGGCCGG TCACAACATG GGCCTGCGCC ACTCCTACGA ACAGGACATG
CAGGAAGGCT ACTACAACAC CAACGGCCAC AACGGCACGC ATGAATGGAG CCGTGGCTAC
GGCGTGCAGG GCCAGTTCAG CACCATCATG GCCTACCCCC AGGTTTTCGG CGCACGCCGC
CAGGCACCGG TGTTCTCCAA CCCGCGCCTG CGCGACAGCG AATGCGCCAA CCAGGCCTGC
GGCCAGAACG AGCATGCCGA TGCAGTACGC GCCCTGAACG CCATGGCCGG CCAGATCGCG
GCATTCCGCC CGACACTGGT GCCCGTCACC GGCAACCCGG GAACCACCAA CCCCGGTACG
CCACCGACCG AACTGCCCTG GTGCAGCAAG CCGGCGCTGA AGGGGCTGGT GCGCAATGGC
GAGTTCACCA CCAGCGACGA CTGGCGCGCG CTTTTCGGCC AATCCGACCT GAGCCTGGTC
AACGTGGCCC TGAACTGCCG CGACAACGCC CTGCAGATGG ACGCGCGCGG CTTCGACATC
CTGGCCACCC CGGTCAGCGG CCTGCGTGAC GGCGTGCAGT ACCGGCTCCG GGCCAACAGC
ATGCTCAAGG CCCGCAACAG CCGCGAGAAC GTGCGCCTGG CGATCCTGCA GGAGGGTCTC
GACGGCCGCC TGACCTACAG CTCGGAGCAG TCGGCCAGCC TGTCCGTCAG CGGCAACGAA
TTCAGCCGCC TGGAAAAGAC CTTCACCTAC CGGACGCCGG CCAACGCACG CAATCTCTAT
GTGGCGGTGT GGAGCGACAG CGGCAGCAGC CTGCTGATCG ATGAGGTGGA ACTGCAGGAG
ATCCAGAGCA GCACGCCGCC AGCGGCGCCC GCGCAGTTCG GCTGGAACTT CGAAAGTGGC
ATCGGCGGCT GGTCCGGCTA CCACGGCAGC GCGCGCGTCA GCACCTACGC CAGCAGCGGT
CGTCAGGCGC TGGAAGCCTA TCAGCGCGAG TACGAAGGTT CCGGCGCCAG CGTCAGCCTG
CTCGGCAACC TGGAGGCCGG CAAGCGCTAT CGCATCGAGG CGGACCTGAG CATCGGTCGC
AGCACCTCGG TCAGCGCCGT CGCCTACGCC TATCTGTATG TCGAGGACAG CAACGGTCGC
GGTCAGTATC TGCCGCTCGG TCAGCGCAAC ACCCGCGGCG GCAGCTGGAG CAAGCTGCAG
CATGAAGTGC AGCTGCCCGC CGGTCCCCTG CGCCGTGCCG AGCTGTTGCT GCTTGGCACG
CAACGCAGTC AGTCGCTGTT CATCGACAAC GTCAGCGTAA CCCGGCTGTA A
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| Protein sequence | MKNVQWLSAL ALALAAHHAQ ANPETVDIMV LYTKDAQALP NGRDIDARIA SYIEYTNNAY
AKSGVNLRLR LVHKQLLDWA DYYDVSSANL NKFTYDTRVQ RLREQYGADL VQLINRTTQG
QGYGVCGIAW MGTGPKNSDR FNSGAKEMAY GLTGVDCSLS TFAHEAGHNM GLRHSYEQDM
QEGYYNTNGH NGTHEWSRGY GVQGQFSTIM AYPQVFGARR QAPVFSNPRL RDSECANQAC
GQNEHADAVR ALNAMAGQIA AFRPTLVPVT GNPGTTNPGT PPTELPWCSK PALKGLVRNG
EFTTSDDWRA LFGQSDLSLV NVALNCRDNA LQMDARGFDI LATPVSGLRD GVQYRLRANS
MLKARNSREN VRLAILQEGL DGRLTYSSEQ SASLSVSGNE FSRLEKTFTY RTPANARNLY
VAVWSDSGSS LLIDEVELQE IQSSTPPAAP AQFGWNFESG IGGWSGYHGS ARVSTYASSG
RQALEAYQRE YEGSGASVSL LGNLEAGKRY RIEADLSIGR STSVSAVAYA YLYVEDSNGR
GQYLPLGQRN TRGGSWSKLQ HEVQLPAGPL RRAELLLLGT QRSQSLFIDN VSVTRL
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