Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4137 |
Symbol | |
ID | 5105656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4538042 |
End bp | 4539334 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505401 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001189616 |
Protein GI | 146309151 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGCA CCCATACCCT GAGCCTGGGC GACCCGCTGG AGCCCGCACG CAAGGCCACC GCCCGCATGC TGCACGAGCG CGAACGCACC TTCTCGCTGC CACAGCCCTT CTACAACGAC GAGCGCCTGT TCCAGATCGA CATGCAGGAG ATCTTCCACA AGGAATGGCT GATCGCCGGC ATGACCTGCG AGATCCCGAC CAAGGGCAAC TTCATCACCC TGCAGCTGGG CGACAACCCG ATCCTCGTCG TCCGCGGCGC CGAGGGACAG ATCCACGCCT TCCACAACGT CTGCCGTCAC CGCGGCTCGC GTCTGTGCGT GAGCGACAAG GGCAAGGTGG CCAAGCTGGT CTGCCCCTAC CACCAGTGGA CCTACGAGCT GGACGGCCGC CTGCTGTTCG CCGGCACCGA GATGGGCGCG GACTTCAAGC TCAGCGACTA CAACCTCAAG CCGGTTCACT GCAAGAGCGC CGGCGGTTTC ATCTTCATCA GCCTGGCGGA GAACCCGCCG GCGATCGACG AATTTCTCGC CGGCCTGGCT CACTACATGG AGCCGTACGA CATGGAGAAC ACCAAGGTCG CGGTGCAGAG CGTGATGCCG GAGAAGGCCA ACTGGAAGCT GGTGATCGAG AACAACCGCG AGTGCTACCA CTGCAACGGT TCGCACCCGG AGCTGCTCAA CACCCTGCTG GAGTGGGACG ACACCAACGA CCCGCGCGCA ACCCAGGAAT TCAAGGATCA CGTCGCCGAA TGCGCCGCCG CCTGGGACGC GGAGAAGATT CCTTACGTCC ATGCCGGTTT CGGCCTGCGT AACCGCATCG TGCGCATGCC GCTGCTCAAG GGCACCGTGT CCATGACCAT GGACGGCAAG CCGGGCTGCA AGAAGCTGAT GGGGCGCATC CAGAACCCGG ACCTGGGCTC CATGCGCATC CTCCACCTGC CGCACTCGTG GAACCACTGC ATGGGTGACC ACCTGATCAA CTTCACCGTG TGGCCGATCA GCGCCCAGGA GACGGTGGTG ATCACCAAGT GGCTGGTGCA CAAGGACGCG GTGGAAGGCG TCGATTACGA CGTCGAGCGC CTGCGCCAGG TGTGGGACGC CACCAACGAC CAGGACCGTC GCCTCGGCGA GGAAAACCAG CGCGGCATCA ACTCCACCGC CTACCAGCCC GGCCCGTACT CCAAGACCTA CGAGTTCGGC GTGGTCAACT TCCTCGACTG GTACAGCGAG CGCATGCTCA ACAACCTCGG CGACACCCCG GCGCAGTCGC TGCGCCAGGC CTCGGGCGAG TGA
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Protein sequence | MDCTHTLSLG DPLEPARKAT ARMLHERERT FSLPQPFYND ERLFQIDMQE IFHKEWLIAG MTCEIPTKGN FITLQLGDNP ILVVRGAEGQ IHAFHNVCRH RGSRLCVSDK GKVAKLVCPY HQWTYELDGR LLFAGTEMGA DFKLSDYNLK PVHCKSAGGF IFISLAENPP AIDEFLAGLA HYMEPYDMEN TKVAVQSVMP EKANWKLVIE NNRECYHCNG SHPELLNTLL EWDDTNDPRA TQEFKDHVAE CAAAWDAEKI PYVHAGFGLR NRIVRMPLLK GTVSMTMDGK PGCKKLMGRI QNPDLGSMRI LHLPHSWNHC MGDHLINFTV WPISAQETVV ITKWLVHKDA VEGVDYDVER LRQVWDATND QDRRLGEENQ RGINSTAYQP GPYSKTYEFG VVNFLDWYSE RMLNNLGDTP AQSLRQASGE
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