Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4090 |
Symbol | |
ID | 5106387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4479768 |
End bp | 4480508 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640505354 |
Product | amidophosphoribosyltransferase-like protein |
Protein accession | YP_001189569 |
Protein GI | 146309104 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTCT TTCCAGCTTC GCTCGCGCAT CGCCTTGCCT GGCTGCGCCC CAGGCGCCAC TGCCAGCTGT GCGATGAAGC CAGCGATCAC GCCGAACTGA GCATCTGCAG CGCCTGCCAG GCCGATTTGC CCTGGCTCGG CGCACACTGC CAGGTCTGCG CAGTGCCGCT ACCGGCCCAA GGCATGATCT GCGGCGCCTG CCAGAACAAG CCGCCGAGCT TCGCCCGCGT GGAAGCGCCG TGGCGCTACG CCTTTCCGGT GGACAACCTG ATCACCCGCT TCAAGCACCA GGGCCAGTGG CCCCACGGCC GCCTGCTCGG CGAGCTGCTG GCCGAGCACC TGAGCCACGC CTATGACGAA GGGCTGGTGC GCCCGCAGGT GCTGCTACCG GTGCCACTGG CACGCAAGCG CCAGCGACTG CGCGGCTTCA ACCAGGCGCA GATGCTCGCC ACCTGGCTGG GCGCCAGCCT GGGTTTGCCG GTGCAGCATG ACTGGCTGCA GCGCCGCATC GACACGCCCG CGCAGCAGGG TCTGGACGCC GCCACGCGCA AGCGCAACCT GCGCCAGGCC TTCACCCTGG ATGCCAAAGC GCAGGTTGCC GGCTGCCATC TGGCGCTGGT CGACGACGTA CTCACCACGG GCGCGACCGC CGGTACGCTC GCCCGTTTGC TGCGCCACGC CGGTGCCCAG CGGGTCGATG TCTACTGCCT GGCCCGCACG CCGCGCCCGG GCGATGGCTG A
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Protein sequence | MPFFPASLAH RLAWLRPRRH CQLCDEASDH AELSICSACQ ADLPWLGAHC QVCAVPLPAQ GMICGACQNK PPSFARVEAP WRYAFPVDNL ITRFKHQGQW PHGRLLGELL AEHLSHAYDE GLVRPQVLLP VPLARKRQRL RGFNQAQMLA TWLGASLGLP VQHDWLQRRI DTPAQQGLDA ATRKRNLRQA FTLDAKAQVA GCHLALVDDV LTTGATAGTL ARLLRHAGAQ RVDVYCLART PRPGDG
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