Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4027 |
Symbol | dnaG |
ID | 5106324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4402883 |
End bp | 4404874 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640505290 |
Product | DNA primase |
Protein accession | YP_001189506 |
Protein GI | 146309041 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.570104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCC TGATTCCGCA ATCCTTCATC GATGACCTGC TCAACCGCAC CGACATCGTC GATGTGGTGA GTTCGCGCAT CCAGCTGAAG AAGACCGGCA AGAACTACAG CGCCTGCTGT CCGTTCCACA AGGAAAAGAC CCCCTCCTTC ACCGTCAGCC CGGACAAGCA GTTCTACTAC TGCTTCGGCT GCGGCGCCGG CGGCAATGCC CTCGGCTTCG TCATGGACCA CGATCAGCTG GAATTCCCCC AGGCGATCGA GGAACTGGCC AAGCGCGCCG GCATGGACGT GCCGCGCGAG GAAGGTGGTC GCGGGCGCAC ACCGCGCCAG CCGGTGGACT CGCCGCTCTA CCCGCTGCTG GAGGCCGCCG CCGAGCATTA TCGCCAGGCG CTGAAGAGCC ACCCGCAGCG CAAGTACGCC GTGGACTATC TCAAGGGCCG CGGCCTGACC GGTGAAATCG CCCGCGACTT CGGCCTCGGC TTCGCCCCGC CCGGCTGGGA CAACCTGCTC AAGCAGCTGG GCGGCGACGC CCTGCAGCAG AAGGCGATGA TCGACGCCGG CCTGCTGATC GAGAACGCCG ACAACGGCAG GCGCTACGAC CGCTTCCGCG ACCGCATCAT GTTCCCCATC CGCGACAGCC GCGGCCGGGT GATCGCCTTC GGCGGCCGGG TACTGGGCGA CGACAAGCCC AAGTACCTCA ACTCGCCGGA AACCGCGGTG TTCCACAAGG GCCAGGAGCT CTACGGCCTG TACGAGGCAC GCAAGCACAA CCGCGACCTC GACGAGATCA TGGTGGTCGA AGGCTACATG GACGTCATCG CCCTGGCCCA GCAGGGCCTG CGCAATGCCG TGGCGACCCT GGGCACGGCC ACCAGCGAGG AGCACCTCAA GCGTCTGTTT CGCATCGTGC CCAGCGTGCT GTTCTGCTTC GACGGCGACG CCGCCGGGCG CAACGCCGCC TGGCGCGCCC TGGAATCCAC CCTGCCGAGC CTGCAGGACG GCCGCCGCGC ACGCTTTCTG TTCCTGCCCG AAGGCGAAGA CCCGGACACC CTGGTGCGCG CCGAGGGCAC CGACGCCTTC CGCGCACGCA TCAACCAGCA TGCCCAGCCG CTGGCCGACT ACTTCTTCCA GCAGCTGTCC GAAGAAGCCG ACCCGCGCTC GCTGGAAGGC AAGGCGCACC TGGTGACCCT GGCCGCGCCG CTGATCGACA AGATTCCCGG CAACAACCTG CGCGCCCTGA TGCGCCAGCG CCTGAGCGAG ATCACCGGTC TTTCCGGCGA GGCCCTCAGC CAGGTGGCCA GCGCCCCGCG CAGCCACGCA CCGAGCACCA TCAGCCAGGC GCCCAGCAGC GACTATCCGG ATTACGGCGA TATCCCCGAC AGCGCCTATT ACGACGCCAT GCCGGATCTC GGCGGCTACG AGCAGCCCGC CCCGCCCCAG CAGCAGGCTT ACGAGCGCAG CAACGACGGC GGCAAGGGCA ACTGGAAGAA AGAAGGCGGC AAGTGGAGCA AGAAGGGCAA GGGCGACTTC GCCCCGCGCG CGCCACGCAC CGCCGTCAGC GTCGAATCGC CGCATCTGAG CGCCCTGCGC ACTCTGCTGC ACCATCCGCA ACTGGCGCAG AAGGTGGAGG ATGTCAGCCA CTTCGCCGAC GAGGAAGACA CCTACGCGCA GCTGCTGGTG GCCCTGGTCG GCGCCTTGCA GAAGAACCCC GGCATGCGCT CGCTGCAACT GATCGCGCGC TGGCACGGCA CCGAACAGGG CCGTCTACTA CGGGCCCTGG CGGAAAAGGA ATGGTTGATT TCGGCGGACA ACCTTGAACA ACAGTTTTTC GACACTATAA CTACTCTTGC AGCCCGCCAA CGCGAGCGCA GCCTGGAGCA GTTGCTGCGC AAGGCCCGCC TAAGTGAGTT GAGCGCAGAG GAAAAAGATC AGCTGCGCGC CCTGCTAAGC CGTAACGCAT TACCAGTCTC CCCCTCCCCA ACTGGCGCGT AA
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Protein sequence | MAGLIPQSFI DDLLNRTDIV DVVSSRIQLK KTGKNYSACC PFHKEKTPSF TVSPDKQFYY CFGCGAGGNA LGFVMDHDQL EFPQAIEELA KRAGMDVPRE EGGRGRTPRQ PVDSPLYPLL EAAAEHYRQA LKSHPQRKYA VDYLKGRGLT GEIARDFGLG FAPPGWDNLL KQLGGDALQQ KAMIDAGLLI ENADNGRRYD RFRDRIMFPI RDSRGRVIAF GGRVLGDDKP KYLNSPETAV FHKGQELYGL YEARKHNRDL DEIMVVEGYM DVIALAQQGL RNAVATLGTA TSEEHLKRLF RIVPSVLFCF DGDAAGRNAA WRALESTLPS LQDGRRARFL FLPEGEDPDT LVRAEGTDAF RARINQHAQP LADYFFQQLS EEADPRSLEG KAHLVTLAAP LIDKIPGNNL RALMRQRLSE ITGLSGEALS QVASAPRSHA PSTISQAPSS DYPDYGDIPD SAYYDAMPDL GGYEQPAPPQ QQAYERSNDG GKGNWKKEGG KWSKKGKGDF APRAPRTAVS VESPHLSALR TLLHHPQLAQ KVEDVSHFAD EEDTYAQLLV ALVGALQKNP GMRSLQLIAR WHGTEQGRLL RALAEKEWLI SADNLEQQFF DTITTLAARQ RERSLEQLLR KARLSELSAE EKDQLRALLS RNALPVSPSP TGA
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