Gene Pmen_4009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4009 
Symbol 
ID5110232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4383597 
End bp4384622 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID640505272 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001189488 
Protein GI146309023 
COG category[R] General function prediction only 
COG ID[COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC ACGATGTACG TCTGCAACAC CTGCAAGTCT GGCTCGCCGA GCAATTGCCA 
CTGCTGTTCG CCGAGCGAGG CTGGGGCCCG GTGCCGGCTG CCGAGCTGAC CCCCGCCAGC
AGCGATGCCA GTTTTCGCCG CTATTTCCGT TGGCAGAGCG GAGTGCGCAG CCTGATCCTG
ATGGACGCGC CGCCGCCGCA GGAGGATTGC CGCCCCTTCG TCAGGGTCGC CGCCCTGCTG
GCCAGTGCCG GCGTGCATGT GCCGCAGGTG CTGGCTGCCA ATCTCGAGCA GGGCTTTCTG
GTGCTGGATG ATCTGGGCCG CCAGACCTAT CTCGAGGTGA TCGACGAGGC CAATGCCGAT
TCGCTGTTCG CCGATGCCAT CGATGCGCTG CTGGCCCAGC AGCTCTTGCC GATGGACGCC
GATCTGCCGC ATTACGACGA GGCGCTGCTG CGCCGCGAGC TGCAACTGTT TCCCGAGTGG
TACGTGCAGC GCCACCTGCA GGTCGAGTTC AATGCCGAGC AGCAGGCGGC CTGGCAGCGC
ATCAGCCAGC TGCTGATCGA CAGCGCCCTG GCCCAGCCCA AGGTGCTGGT GCATCGCGAT
TTCATGCCGC GCAATCTGAT GCACAGCTCG CCCAATCCCG GCGTGCTGGA CTTTCAGGAT
GCCGTATACG GCCCGGTGAC CTATGACATC ACCTGCCTGT TCAAGGATGC CTTTCTCAGC
TGGCCCGAGG CGCGGGTGCA GGGCTGGCTG CAGGGATACT GGGAACGGGC ACGGGCGGCC
GGTATTCCGG TACAGGCGTC GCTGGAGGAC TTCCTGCGCG CCAGCGATCT GATGGGTGTG
CAGCGCCACC TCAAGGTGAT CGGCATCTTC GCGCGCATCT GCCATCGCGA CGGCAAGCCC
AAGTATCTGG GTGACGTACC GCGCTTCTTC GCTTACATCC GTGCCGTACT GGCGCGCCGG
CCGGAGCTGG CCGAGCTGGG TGAACTGTTC GCCAGCCTGG CGATAGAAGA AGGGGCGCTT
GCATGA
 
Protein sequence
MPEHDVRLQH LQVWLAEQLP LLFAERGWGP VPAAELTPAS SDASFRRYFR WQSGVRSLIL 
MDAPPPQEDC RPFVRVAALL ASAGVHVPQV LAANLEQGFL VLDDLGRQTY LEVIDEANAD
SLFADAIDAL LAQQLLPMDA DLPHYDEALL RRELQLFPEW YVQRHLQVEF NAEQQAAWQR
ISQLLIDSAL AQPKVLVHRD FMPRNLMHSS PNPGVLDFQD AVYGPVTYDI TCLFKDAFLS
WPEARVQGWL QGYWERARAA GIPVQASLED FLRASDLMGV QRHLKVIGIF ARICHRDGKP
KYLGDVPRFF AYIRAVLARR PELAELGELF ASLAIEEGAL A