Gene Pmen_4007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4007 
Symbol 
ID5110230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4382167 
End bp4382928 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID640505270 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_001189486 
Protein GI146309021 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTGGC CGGCAACCAT GCTAGGGGCT GCCGCGGGCC TGGCGCTGGC CAGCATTCCC 
GGTGCGCTGC TCGGCGGGCT TCTCGGGCAG GCGCTGGATC GCCGCCTGCG TCTGCACGGC
TGGGACAATC TGCGCGAGCG CCTTGGCGGA CGTGCAGCCC CGGCGGACGA CGAATTGCTG
TTTCTGATGC TCGGTCGTCT GGCCAAGAGC GATGGCCGCG TGGTGCAGCG TCACATCCAG
CAGGCGCGCT CGGAGATGCA GCGTCTGGCG CTCGATGAAG CTGGGCAGCG ACGTGCCATC
GAAGCCTTCT CCCGTGGCAA GACCGGGCGC GACAATCTGC GCCGACCGCT GCAGCGTCAG
CGCGAGCGTG CCGAGCAACT GCTACGTGCC TGTTGGCGTA TGGCCTGGGT CGACGGGCGA
GTGCCGCCCA GCGAACGTGA ATTGATCCTG TTGTGGGGCA AGTGGCTGGG CTGGGACAGT
GCCCGTCTCG ACGTCCTGGG CGAGGAGTAT GCGCCGCGCC GAGGACAGCA ACCGACCCCG
GCGGGTGGCA GTTACCAGGA GGCCTTGCGC CTGCTCGGGG TGAACGAAGG CAGCGAGCCG
GAGCAGATCA AACGCGCCTA TCGCCGCCTG CTCAGCCGCC ATCATCCGGA CAAGTTGGCC
GGCTCCGGCG CCTCACCGGA ACGAATTCGC GAGGCGACCG AAACCACCCG ACAGTTGCAT
CAGGCCTATG CGCTGGTGCG CCAGCGTCGA GGTCTGCGCT AG
 
Protein sequence
MLWPATMLGA AAGLALASIP GALLGGLLGQ ALDRRLRLHG WDNLRERLGG RAAPADDELL 
FLMLGRLAKS DGRVVQRHIQ QARSEMQRLA LDEAGQRRAI EAFSRGKTGR DNLRRPLQRQ
RERAEQLLRA CWRMAWVDGR VPPSERELIL LWGKWLGWDS ARLDVLGEEY APRRGQQPTP
AGGSYQEALR LLGVNEGSEP EQIKRAYRRL LSRHHPDKLA GSGASPERIR EATETTRQLH
QAYALVRQRR GLR