Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3924 |
Symbol | |
ID | 5107296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4305366 |
End bp | 4306043 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640505182 |
Product | sporulation domain-containing protein |
Protein accession | YP_001189403 |
Protein GI | 146308938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGGA TTCTTCTGCT GCTCATATTG CTCAATGCCT TTTATTACGT GTGGCATCAA CAGCAGGCTC CCTTGCGGGC CAAGGAAGTG GCGCCGGCGG GCGCCTATCA GGGTGCGAGG CAGGATATTC GCTTGCTGAG CGAGTCCAGC TCGCCGCGCG CCAGGGTGGA TGAATCCGCG TCTGCCAGTG CATCTGCTGC TGTGTGTCTC TATCTCGGAA GCTTCGAGGC AGAAGAGAAG GCCAGAGTGG TCGAGCAGCG CCTGTTGAGT CTGGATATTC AGGCCGAGGT GCGTAGTGTC GATGCTGCGG CTGGGGTCGA GTATTGGGTC TATCTGCCGC CGCTCGCCTC CAGGCAGGCG TCTCTTCGTC AGTTGCGAGA GCTTCAGGCG CGGCGCATCG ACAGTTACAT CATTACCCAG GGCGAGCTGG CCAATGGCAT TTCTCTCGGC ATATTTCCTC GCGGCGACTC GGCTGGCAGT GTCATGCAGC GCTTGCGGGA GGCGGGGTAC GAGCCGCAGA TGCGCGAACT GTCGCGTGCG CATCGCAGCT TCTGGGTACG TGTAGCGCCT GAAAGCAGGC GCTTGGCCGA TGAGTTTTTA CTTGGGCGTT TGGCTGGAGA CTTTGCTGGT TTGCAGCATC AATTAATGCC GTGTGAAGGC GTTGCATTGC TTCAGTAG
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Protein sequence | MRWILLLLIL LNAFYYVWHQ QQAPLRAKEV APAGAYQGAR QDIRLLSESS SPRARVDESA SASASAAVCL YLGSFEAEEK ARVVEQRLLS LDIQAEVRSV DAAAGVEYWV YLPPLASRQA SLRQLRELQA RRIDSYIITQ GELANGISLG IFPRGDSAGS VMQRLREAGY EPQMRELSRA HRSFWVRVAP ESRRLADEFL LGRLAGDFAG LQHQLMPCEG VALLQ
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