| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3909 |
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| Symbol | rplC |
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| ID | 5106443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4285936 |
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| End bp | 4286565 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640505163 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001189388 |
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| Protein GI | 146308923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.031884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTG GTGTAGTCGG TCGTAAGTGC GGCATGACCC GCATTTTCAC CGAAGAAGGT
GTCTCCATTC CGGTCACGGT CATCGAGATC GAGCCGAATC GCGTCACCCA GTTCAAAAAC
GAGGAGTCCG ATGGCTACCG CGCAGTGCAG GTCACTGTCG GTGAGCGTCG CGCCTCGCGC
GTCAGCAAGG CTCAGGCCGG TCACTTCGCC AAGGCGAACG TCGCGGCAGG TCGCACTGTT
ATGGAGTTCC GTCTTGAAGA AGGCGACTAC CAGGCTGGCG ATCTGATCAA CGCTGAAATT
TTCCAAGCTG GTCAACTGGT GGATGTCACC GGTCAGTCCA AAGGTAAAGG CTTTGCCGGT
ACCATCAAGC GTTGGAACTT CCGCGGCCAG GACAACACTC ACGGTAACTC CGTTTCTCAC
CGTGTACCGG GTTCCATCGG CCAGTGCCAG ACCCCGGGTC GTGTATTCAA GGGCAAAAAG
ATGTCCGGTC ATATGGGCGC TGAGCGCGTG ACCGTACAGT CCCTGGAAGT CGTTCGCGTA
GACGCCGAGC GTAATCTGCT GCTGGTCAAG GGTGCCGTTC CGGGCGCTAC TGGCGGCGAT
GTTATCGTTC GTCCGGCTGT CAAGGCGTAA
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| Protein sequence | MTIGVVGRKC GMTRIFTEEG VSIPVTVIEI EPNRVTQFKN EESDGYRAVQ VTVGERRASR
VSKAQAGHFA KANVAAGRTV MEFRLEEGDY QAGDLINAEI FQAGQLVDVT GQSKGKGFAG
TIKRWNFRGQ DNTHGNSVSH RVPGSIGQCQ TPGRVFKGKK MSGHMGAERV TVQSLEVVRV
DAERNLLLVK GAVPGATGGD VIVRPAVKA
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