Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3907 |
Symbol | rplW |
ID | 5106441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4285023 |
End bp | 4285322 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640505161 |
Product | 50S ribosomal protein L23 |
Protein accession | YP_001189386 |
Protein GI | 146308921 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0089] Ribosomal protein L23 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.104737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGG AACGCGTATT CAAAGTGCTG CTTGGCCCGC ACATCTCCGA GAAGGCCACG GTTCTGGCTG ACAAGCAAGG TCAGTTCGTT TTCAAAGTCG CTACCGATGC GACCAAGCTG GAAATCAAGA AGGCCGTCGA AAGCCTGTTC AACGTGAAGG TTGAGCGCGT TACTACCCAG AACGTTCTGG GCAAGAGCAA GCGCACCGCT CGCGGTCTGG GCAAGCGTAA CGACTGGAAG AAGGCAGTTA TCTCCCTTCA GCCGGGCCAA GATCTCGATT TCACCAGCAG TGCTGAGTAA
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Protein sequence | MNQERVFKVL LGPHISEKAT VLADKQGQFV FKVATDATKL EIKKAVESLF NVKVERVTTQ NVLGKSKRTA RGLGKRNDWK KAVISLQPGQ DLDFTSSAE
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