| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3882 |
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| Symbol | |
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| ID | 5106416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4271694 |
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| End bp | 4273073 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505136 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001189361 |
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| Protein GI | 146308896 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC CTACTGCTCT GAGTCTTATC CCGCCTGCCG TTGTCCTGAC CCTCGCCATC
TGGCTGCGTC GCCCCATCCT CGCCTTGCTG ATCGGCGCCT GCAGCGGCCT GCTGCTGCTT
TCGCCGCAGG ATGCGCTGGG CAGCTTCGCG GAAATTTCCC TCAAGGTGAT GCAGGACGAA
ACCATCGGCT GGCTGATCCT GGTGTGCGGC AGCTTCGGCG CACTCATCGC CCTGCTGGTG
CGTACCGGTG GCGCGCTGGC CTTCGGCCGC AGCGCACTGA AGCTGGCCAA GGGGCGCCGC
TCTTCGTTGC TGATGACCTT CGTGCTCGGC GTGGTGATCT TCGTCGACGA CTACCTCAAT
GCCCTGACGG TGGGCGAGAC CATGAAGCGC GTCACCGACC GCTTCAGAAT CTCCCGCGAG
AAGCTGGCCT ACGTGGTCGA CTCCACCGCC GCGCCGATCT GCGTGCTGGT GCCGCTGTCC
ACCTGGGCGG TGTTCTTTGG CGGCCTGCTG GAGAACAACG GCATCGCCGA GACCGGTCAG
GGCATCAACG TGTATATCCA GGCCATTCCC TACATGCTCT ATGCCTGGGC CGCGGTGCTG
CTGGTGGTGC TGGTGGCCGC CGGGCTATTC CCGGACATCG GGCCGATGCG CAAGGCCGAG
TTGCAGGCGC GCCACGGTTC TGCCGGTGCC ATGCACGTTG GCGAGCTGAG CCCCGAGCAC
AACTACTCGA TGAAGTCGCT GGAGGAGGAG TTCGAAGGCG CCGACAAGGA GAGCGGCAAG
CTGCACAACT TCCTGGTGCC GCTGGCCATG CTGGTCGGCT TCACCGTGTA TTTCGACATC
GACGTGTGGA TGGGCATGAT CGCCACCATG CTGCTGACCC TGCCGTTCTA TCTGGTGCAG
CGCCTGATGC CGCTGTCGGA GATGCTCGAT CAGATGGTCG ACGGCTTCAA GACCATGTTG
CCGGCCATCG GCATCTGCGT GGCGGCCTTC GTGTTCAAGG ACGTCTGCGA TCAGCTGATG
CTGCCGCAGT ACGTGGTCGA GACGCTCAAG CCCTACATGA CGCCGCAGAT GCTGCCGGCC
ATGGTGTTCC TGTGCATGGC GGTGCTGAGC TTCGCCACCG GCTCGTCCTG GGGCATCTTT
GCCGTGACCA TCCCCATCGT CATGCCTCTG GCCTATGCGC TGGGGGCGGA CATTCCGCTG
GTGATCGGCG CGCTGATGTC GGCCTCGGCC TTCGGCAGCC AGGCCTGCTT CTACAGCGAC
TCCACGGTGC TGGCGGCGCA GGGCTCGGGC TGCAATCTGA TCAGCCACGC CATCACCCAG
CTGCCCTACA CCCTGGTGGC TGCCGGTCTG GCTTTCGTGG GTTTCATCCT CGTCGCCTGA
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| Protein sequence | MSEPTALSLI PPAVVLTLAI WLRRPILALL IGACSGLLLL SPQDALGSFA EISLKVMQDE
TIGWLILVCG SFGALIALLV RTGGALAFGR SALKLAKGRR SSLLMTFVLG VVIFVDDYLN
ALTVGETMKR VTDRFRISRE KLAYVVDSTA APICVLVPLS TWAVFFGGLL ENNGIAETGQ
GINVYIQAIP YMLYAWAAVL LVVLVAAGLF PDIGPMRKAE LQARHGSAGA MHVGELSPEH
NYSMKSLEEE FEGADKESGK LHNFLVPLAM LVGFTVYFDI DVWMGMIATM LLTLPFYLVQ
RLMPLSEMLD QMVDGFKTML PAIGICVAAF VFKDVCDQLM LPQYVVETLK PYMTPQMLPA
MVFLCMAVLS FATGSSWGIF AVTIPIVMPL AYALGADIPL VIGALMSASA FGSQACFYSD
STVLAAQGSG CNLISHAITQ LPYTLVAAGL AFVGFILVA
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