Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3869 |
Symbol | |
ID | 5106403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4256383 |
End bp | 4256793 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640505123 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_001189348 |
Protein GI | 146308883 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATGC GTCGTCACCA CCAGCAGGAC GAAGACACCG GCATCGACCT CACGCCGATG CTCGACGTGG TCTTCATCAT GCTGATCTTC TTCATCGTCA CCAGCTCGTT CATTCGCGAG TCCGGGGTCG AAGTGCAGCG CCCGCAGGCG GAAACCGCCA ATCCGCAGGA CAAGGGCAAC ATCCTCATCG CCGTCACCGC CGACGGGCAG ATCTGGATGG ACAAGCAGTC GGTGGACATC CGCAGCGTGC GTGCCCATGT CGAGCGCATG CGCGTCGATC AGCCTGAAGG CGCCGTGGTG GTTCAGGCCG ACAAGGATGC GCGTACCGGC CTGGTCGTCC AGGTGATGGA TCAGGCGCGT CTGGCCGGTG TGCAGGATGT CGCGCTGGCT GCCGGTAGCG GAGTCAACTG A
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Protein sequence | MRMRRHHQQD EDTGIDLTPM LDVVFIMLIF FIVTSSFIRE SGVEVQRPQA ETANPQDKGN ILIAVTADGQ IWMDKQSVDI RSVRAHVERM RVDQPEGAVV VQADKDARTG LVVQVMDQAR LAGVQDVALA AGSGVN
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