| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3854 |
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| Symbol | ribH |
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| ID | 5106084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4243879 |
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| End bp | 4244355 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505108 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_001189333 |
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| Protein GI | 146308868 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGA AGACCATCGA AGGTACCTTC ATCGCCCCTA AGGGCAAATA CGCCCTGGTG
GTGGGCCGTT TCAACAGCTT CGTCGTCGAG AGCCTGGTCA GCGGCGCCAT CGACGCCCTG
GTTCGCCACG GCGTGAGCGA GAGCGACATC ACCATCATCC GCGCACCGGG CGCCTTCGAG
ATTCCGCTGG TGACCCAGAA GGTCGCTCAG CGTGGCGAGT ACGCGGCGAT CATCGCCCTG
GGCGCGGTGA TCCGTGGCGG CACCCCGCAC TTCGAATACG TGGCGGGCGA GTGCACCAAG
GGCCTGGCCC AGGTGTCCAT GGAATACGGC GTGCCGGTCG CCTTCGGCGT GCTGACCGTC
GATTCCATCG AACAAGCCAT CGAACGTTCC GGCACCAAGG CGGGTAACAA GGGTGCCGAA
GCTGCGCTGT CTGCCCTGGA AATGGTCAGC CTGCTGGCGC AGTTGGAGGC CAAGTGA
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| Protein sequence | MTLKTIEGTF IAPKGKYALV VGRFNSFVVE SLVSGAIDAL VRHGVSESDI TIIRAPGAFE
IPLVTQKVAQ RGEYAAIIAL GAVIRGGTPH FEYVAGECTK GLAQVSMEYG VPVAFGVLTV
DSIEQAIERS GTKAGNKGAE AALSALEMVS LLAQLEAK
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