| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3837 |
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| Symbol | |
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| ID | 5106067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4225986 |
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| End bp | 4227173 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505091 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001189316 |
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| Protein GI | 146308851 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGC TATTGTCGTT TCCGCGTCGT CTGAAGCCGT GCCTGGCTGC GGCGTTCGCG
TTGAGTTGTT GGTTTTCCCT GTCCGCACAG GCGGCCGAGC CGATCAAGGT CGGCCTGGTG
GCGGCGCTGT CCGGGCAGTC AGCGAAGTCC GGCGAGGCGC TGACCCGCGG TCTGACCATC
GCCATCGACG AGGTCAACGC CCAGGGCGGT GTGCTCGGGC GTCCGCTGCA ATTGGTGCGC
CGCGATGACG AAAGCAACCC GTCCAAGGGG CTGCTGGCGG CGCGCGAGCT GATCCAGCGG
GAGAAGGTCG CGGTGCTCTT CGGCGGGCTG GATACGCCGG TGTCGCTGGC CATAGTGCCG
CTGGCCAATC AGATGAAGAT GCCGTTCATG GGGGTATGGG CGGCCGGCAC GCCGATCACC
CGCAACGGCG CCGCCGACAA CTACGTGTTC CGCGTGTCGG CGGTGGACGA GCTGGTGGAC
GAGGCGCTGG TCAGCTACGC GCAGAAGCAC TTCGCCACCC AGAAGCCGGG GATGATCCTG
ATCAACAACC CCTGGGGCGA ATCCAACGAG CAGGGTTTCC GCAAGGCGCT GGCCGCGCGC
GGCATGCCGG TGGCCGGGGT GGAGCGCATC GAGGGCAGCG ATCTCGATGT GGTGCCGCAG
CTCAGTCGAC TGAAGCAGGC CGGCGCCGAT ACCCTGCTGC TGGTGGCCAA CGTCGCGCCG
TCGGCGCAGG TGGTCAAGTC GCTCGACCGC ATGGGCTGGG ACGTGCCGGT GGTGTCGCAC
TGGGGGCCGG CCGGCGGACG TTTCGGTGAG CTGGCCGGGC CCAATGCCGG GCGTGTGCAC
TTCATCCAGA CCTACACCTT CAGCCAGGAG GGCGACGCCA GGGGCGAGGC GATCTTCGCC
GCGCTGCAAA AGCGCTATCC GGAGATCAAG AGCCTGGCCG ACGTCACCCC GGCGGTGGGC
ATCGCCAACG CCTACGACGC CCTGCACCTG ACCGCGCAGG CCATCGCCGC CGCCGGCAGC
ACCGAGGGGC CGGCGATCCG CGACGGCTAC TACGGCATCC AGCGCTACGA AGGCCTGATC
AAGACCTACG AGAAACCGTT CAGCGCCGAG CAGCACGATG CTCTGGGCGT GGACGACTAC
GTGTTCACCC GCTTCGAGGG TGACGAAATC GTGCCGATCC AGCACTGA
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| Protein sequence | MSTLLSFPRR LKPCLAAAFA LSCWFSLSAQ AAEPIKVGLV AALSGQSAKS GEALTRGLTI
AIDEVNAQGG VLGRPLQLVR RDDESNPSKG LLAARELIQR EKVAVLFGGL DTPVSLAIVP
LANQMKMPFM GVWAAGTPIT RNGAADNYVF RVSAVDELVD EALVSYAQKH FATQKPGMIL
INNPWGESNE QGFRKALAAR GMPVAGVERI EGSDLDVVPQ LSRLKQAGAD TLLLVANVAP
SAQVVKSLDR MGWDVPVVSH WGPAGGRFGE LAGPNAGRVH FIQTYTFSQE GDARGEAIFA
ALQKRYPEIK SLADVTPAVG IANAYDALHL TAQAIAAAGS TEGPAIRDGY YGIQRYEGLI
KTYEKPFSAE QHDALGVDDY VFTRFEGDEI VPIQH
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