Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3794 |
Symbol | |
ID | 5106025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4181938 |
End bp | 4183098 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505049 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_001189274 |
Protein GI | 146308809 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA CCAGCTTCGC GCAACGTGCC TTCCTCTTCC TGGGCCTGCT GACCGCACCG CTCGCCTGGT CCAGCCAGCA AGTGGTTCCC GCTCCCCCGC AACTGGCCGC GACTTCCTAC GTGCTGATGG ATGCCGCCAG TGGCCAGGTG CTGGTGGAGA GCAACGGTGA CCAGCGCCTG CCGCCGGCCA GCCTGACCAA GCTGATGACC GCCTATATCG CCACCCTGGA GATCAACCGC GGCCAGATCA AGGAAAGCGA CATGGTCCGC GTCAGCGAGA AGGCCTGGCG CAAGGGCGGC TCGAAGATGT TCATCGAGGT GGGCAAGGAA GTCTCGGTGG ACGATCTGCT GCACGGCATC ATCATCCAGT CGGGCAACGA CGCCAGCATC GCCATCGCCG AGCACATCGC CGGTAGCGAG GACGCCTTCG CCGACATGAT GAACACCCAT GCCCAGCGTC TCGGCATGAG CAATACCCAC TTCATGAACT CCACCGGCTG GCCGGACCCG GAGCATTACT CCTCGGCGCA CGACATGGCC AAGCTGGCCC GCGCGATCAT CTACGAGGAC CCGGCTCACT ACGATATCTA CAAGCAGAAG GAATTCCTCT GGAACGGCAT CAAGCAGCCG AACCGCAACC TGCTGCTGTG GCGTGACAGT ACGGTCGATG GCCTCAAGAC CGGCCACACC GAAGAAGCCG GTTACTGCCT GGTGGCCTCT GCCGTGCGTG ACGGCCAGCG CCTGATCGCC GCCGTGTTCG GCACCGTCAG CGAGCAGGCC CGCGCCGCCG AGGTACAGAA GCTCCTGACC TACGGCTTCC GCTTCTTCGA AAGCCGCACC TTCTACAAGA AGGGCACCGA GCTGGCGCAG GCTACCGTCT GGAAGGGCAC CACGCATCAG GTCAAGGCCG GCCTGGCCGA GGACCTGACC ATGACCCTGC CCAAGGGCCA GCTGGAGAAG CTGCAGGCGA GCATGAGCCT CAATCCGCGT CTGATCGCGC CGATCCAGCA GGGCGACGTG ATCGGCAAGG TCGAGGTCAA GCTGGGCGAG GAGGTGGTGC GCAGCACAGA CCTGGTGGCC CTCGAGGCGG TCGAAGAGGG CGGTCTGCTG CGCCGTCTGT GGGACAGCAT CCGACTGTTC TTCTTCGGCC TGTTCAACTG A
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Protein sequence | MNITSFAQRA FLFLGLLTAP LAWSSQQVVP APPQLAATSY VLMDAASGQV LVESNGDQRL PPASLTKLMT AYIATLEINR GQIKESDMVR VSEKAWRKGG SKMFIEVGKE VSVDDLLHGI IIQSGNDASI AIAEHIAGSE DAFADMMNTH AQRLGMSNTH FMNSTGWPDP EHYSSAHDMA KLARAIIYED PAHYDIYKQK EFLWNGIKQP NRNLLLWRDS TVDGLKTGHT EEAGYCLVAS AVRDGQRLIA AVFGTVSEQA RAAEVQKLLT YGFRFFESRT FYKKGTELAQ ATVWKGTTHQ VKAGLAEDLT MTLPKGQLEK LQASMSLNPR LIAPIQQGDV IGKVEVKLGE EVVRSTDLVA LEAVEEGGLL RRLWDSIRLF FFGLFN
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