Gene Pmen_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3741 
Symbol 
ID5105736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4125744 
End bp4126622 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content69% 
IMG OID640504996 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001189221 
Protein GI146308756 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGC CCCATGCCAG GCTGATGCGC CTGGCCACCC GGGCAGCGCT GGCAGTAGCG 
CTGACCCTGG TGCTGGCCAA GGCCATCGCC TGGTGGCTGA GCGGTTCGGT CAGCCTGCTG
GCGGGTCTGA CTGATTCGCT GCTCGACAGC GCCGCCTCGC TGATCAACCT GATCGCCGTG
CATTTCGCCC TGCGCCCGGC CGACGAGGAC CACCGCTACG GCCATGGCAA GGCCGAGGCC
CTGGCGGGTT TGGGCCAGGC GCTGTTCATC GGCGTCAGCG CGGTGCTCAT CGGCCTGCAG
GGCATCGAGC GCCTGCAGGC GCCGCAGCCG CTGGAGGCCG AGGGCGTCGG CATCGCGGTG
ATGCTGCTGT CACTGGCACT GACCCTCGCC CTGCTGGGCT TCCAGCGCAA GGTGGTACGC
GAGACCGGCT CCACCGCCAT CCACGCCGAT TCCCTGCACT ACCGCTCCGA CATCCTGCTC
AATGGCAGCA TCCTGCTCGC CCTGCTGCTG ACCCGCTTCG GCTGGCTGCA GATGGATGCG
ATCTTCGCCA TCGGCATCGC CTTCTACATC TTCTGGAGCG CCATCAGCAT CGTGCGCGGC
GCGGTGGCGG TGCTGATGGA CGAGGCGCTG CCCAGCGAGG TCAGCCAGCA CATGCACCAG
CTCGCCTGCG CCGTGCCCGG CGTACTCGGC GCGCACGACC TGCGCACCCG CGTCTCCGGC
ACCCGCTGGT TCGTCCAGTT GCATCTGGAG CTGCCGGGCA AGATGAGCCT GTCCGAGGCG
CACGCGCACT GCGTGGCAGT GGAGCGAGCG ATTCGCGAGC ATTACCCGAG ATCCGAAGTG
CTGGTGCATG CCGACCCGCC CGAGGTCGTC AGGCACTGA
 
Protein sequence
MHAPHARLMR LATRAALAVA LTLVLAKAIA WWLSGSVSLL AGLTDSLLDS AASLINLIAV 
HFALRPADED HRYGHGKAEA LAGLGQALFI GVSAVLIGLQ GIERLQAPQP LEAEGVGIAV
MLLSLALTLA LLGFQRKVVR ETGSTAIHAD SLHYRSDILL NGSILLALLL TRFGWLQMDA
IFAIGIAFYI FWSAISIVRG AVAVLMDEAL PSEVSQHMHQ LACAVPGVLG AHDLRTRVSG
TRWFVQLHLE LPGKMSLSEA HAHCVAVERA IREHYPRSEV LVHADPPEVV RH