Gene Pmen_3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3685 
Symbol 
ID5110146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4068601 
End bp4069335 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content65% 
IMG OID640504940 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_001189165 
Protein GI146308700 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0748] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGA AAGCCGGCAA GCATGCACGA GAATTGCTGC TCAAGGAATA CCGTGGCGTG 
CTCAGCACCC ACTCCAAGGC CATGCCGGGT TTCCCTTTCG GATCGGTGGT GCCCTACTGC
CTGGACGCCG AGGGCCGGCC GCTGATCCTG ATCAGCCGCA TCGCCCAGCA CACCCATAAT
CTCGGGCAGG ACGCCAAATG CTCGCTACTG GTCGGCGAGC GCGGCGCAGA GGATGTGCAG
GCGGTCGGCC GCCTTACTTT GCTCGCCGAA GCAAGACAGT TGCATGACGA AAGCGAAATC
GAAGCGGCCG CACAACGTTA TTACCGCTTT TTCCCCAAGT CGCGCGACTA CCATCGGGCG
CATGACTTCG ATTTCTGGCG GCTGGAGCCG GTGCGCTGGC GCTTTATCGG CGGCTTCGGC
GCCATTCATT GGCTCGATCA GGTCGCCCAG GCCAATCCCT TCGCGACGGA CGGCAGCGAA
GCGAGCATGG TCGAGCACAT GAACGACGAC CACGCCAATG CCATCGCCCA TTACGTCGAA
CTGGCCGGCC TGCCGCAGCA CGAGCCGGCG CAGATGGCCG GCATCGACAG CGAAGGCTTT
CACCTGCGCA TCGGCCAGAG CCTGTACTGG CTGCCGTTTC CCGCGCCCTG CAGCAACCCC
GGCGCGGTAC GCCAGGCCCT GGTGCAACTG GCCCGGGCCG AGAGCTGGCC GACCAGCGGC
GAGCCTTCAG CTTGA
 
Protein sequence
MSVKAGKHAR ELLLKEYRGV LSTHSKAMPG FPFGSVVPYC LDAEGRPLIL ISRIAQHTHN 
LGQDAKCSLL VGERGAEDVQ AVGRLTLLAE ARQLHDESEI EAAAQRYYRF FPKSRDYHRA
HDFDFWRLEP VRWRFIGGFG AIHWLDQVAQ ANPFATDGSE ASMVEHMNDD HANAIAHYVE
LAGLPQHEPA QMAGIDSEGF HLRIGQSLYW LPFPAPCSNP GAVRQALVQL ARAESWPTSG
EPSA