| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3682 |
|---|
| Symbol | rplU |
|---|
| ID | 5110143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4066074 |
|---|
| End bp | 4066385 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640504937 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_001189162 |
|---|
| Protein GI | 146308697 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.885821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCAG TGATTGTTAC TGGTGGCAAG CAATACAAGG TCACCGAAGG CGAATTCCTC
AAGATCGAGA AGCTTGAGCT CGCCACTGGC GAAGCCGTGA CTTTCGATCG CGTTCTGCTG
ATCGGCAATG GCGACGACGT TAAGATCGGC GCTCCGGTCG TAGACGGCGC CAAAGTGGTT
GCAGAAGTCG TTTCGCAAGG TCGTCACGAC AAAGTGCGCA TCATCAAGTT CCGCCGTCGT
AAGCACCACA TGAAGCGTCA GGGCCACCGT CAGTGGTTCA CTGAGATCAA AATCACCGGT
ATCCAGGCCT GA
|
|---|
| Protein sequence | MYAVIVTGGK QYKVTEGEFL KIEKLELATG EAVTFDRVLL IGNGDDVKIG APVVDGAKVV
AEVVSQGRHD KVRIIKFRRR KHHMKRQGHR QWFTEIKITG IQA
|
|---|
| |