| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3650 |
|---|
| Symbol | |
|---|
| ID | 5110111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4032142 |
|---|
| End bp | 4032810 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640504905 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001189130 |
|---|
| Protein GI | 146308665 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTC TATCCCTGAT CGCCGCCTGC TCCGCTGCAT TGCTGCTGGC CGGCTGCGCC
TCGCAGAACC CCTACGACCA GAGCGCCCCG AGCTCGAACA AGACCGCCAC CTACGGCGGC
CTGGGGGCGC TGGCCGGTGC CGCAGCGGGG GCGCTGATCA ATCACGACAA CCGCGGCAAG
GGGGCGCTGA TCGGCGCCGC GGTGGGCGGT GCGGCCGGTG CCGGTTATGG CTACTACGCC
GACAGGCAGG AGGCCGAGCT GCGTCGGCAG ATGCAGGGCA CCGGTGTCGA GGTGCAGCGC
CAGGGCGACG TGATTCAGCT GATCATGCCC GGCAACATCA CCTTCGCCAC CGACTCGGCG
GAGATCGCCA GCAGCTTCTA CGCGCCGCTG AACAACCTGG CCAACTCCTT CCGCCAGTAC
AACCAGAACA GCATCGAGGT GGTCGGCCAC ACCGACAGCA CCGGTTCGCA CAGCTACAAC
ATGAGCCTGT CGCAGCGCCG TGCGCAGAGC GTGGCCAGCT ATCTGATCGC TCAGGGAGTG
GATGGCAGCC GGGTCAGCAC CCGCGGCATG GGGCCCGATC AGCCGGTGGC GAGCAACGCC
ACGGCCGAAG GGCGCGCGCA GAACCGCCGG GTCGAGGTCA CCCTGCGCCC CCTGCCGGGC
GTGCAGTAA
|
|---|
| Protein sequence | MSRLSLIAAC SAALLLAGCA SQNPYDQSAP SSNKTATYGG LGALAGAAAG ALINHDNRGK
GALIGAAVGG AAGAGYGYYA DRQEAELRRQ MQGTGVEVQR QGDVIQLIMP GNITFATDSA
EIASSFYAPL NNLANSFRQY NQNSIEVVGH TDSTGSHSYN MSLSQRRAQS VASYLIAQGV
DGSRVSTRGM GPDQPVASNA TAEGRAQNRR VEVTLRPLPG VQ
|
|---|
| |