Gene Pmen_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3640 
Symbol 
ID5110101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4018455 
End bp4019192 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID640504895 
Productnitroreductase 
Protein accessionYP_001189120 
Protein GI146308655 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTT TTTCCAACGA GCAACTTCCC GCCGCGGCTT CACCGGCCGA GCTGCGTGCG 
CTGATCGAGA GCCGCCGCGC GGTGCGCCGC TTCACCTCCG AGCCGGTGCC GGACGCGGTG
ATCCGCGATT GCCTGGAGCT GGCCATGCTG GCGCCGAACT CCTGCAACCT GCAGCCCTGG
AGCTTCCAGG TGATCCGCGA CGTGGCCCTG TTGGCGCAGC TGCACCCGGT GTGCATGAGC
CAGAACGCCG CCCGTGCGCC CCTGATCATC GCCGTGCTGG CGCGCCCGGA CACCTGGCGC
CAGGCCTGTC GCAACGTCAT CGAGCAGTGG CCGGAAGCCG AAGTGCCGGC GCGCATCCGC
CACTTCTACA GCAAGACCGC GCCCTTCCAG TACAACCAGG GGCCGCTGGG CCTGCTCGGG
CTGTTCAAGC GGCAACTGGT GCGCCTGGTG GGGCTGCGCA AGCCGCTGAT GCGCAAGCCC
AACAGCAAGG CCGACATGCG CCTGTGGGCG GTGAAGTCCA CTGCGCTGGC GGCGCAGAAT
CTGATGCTGG CCTTCCAGAG CCATGGCTAT GCCACCTGTC CGATGGAAGG CTTCGATGAG
GTGCGCCTGC GCCGCGTGCT GGACATTCCG TGCCAGGCCA TCCCCATCAT GCTGCTGGCC
GTCGGGCGGC AGGGCGAGAA TGGCGTTTAC AACCCGCGTC TGCGCTTTCC GCTGGAGCAG
CAGGTGATCT GGCGCTGA
 
Protein sequence
MTSFSNEQLP AAASPAELRA LIESRRAVRR FTSEPVPDAV IRDCLELAML APNSCNLQPW 
SFQVIRDVAL LAQLHPVCMS QNAARAPLII AVLARPDTWR QACRNVIEQW PEAEVPARIR
HFYSKTAPFQ YNQGPLGLLG LFKRQLVRLV GLRKPLMRKP NSKADMRLWA VKSTALAAQN
LMLAFQSHGY ATCPMEGFDE VRLRRVLDIP CQAIPIMLLA VGRQGENGVY NPRLRFPLEQ
QVIWR