Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3640 |
Symbol | |
ID | 5110101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4018455 |
End bp | 4019192 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640504895 |
Product | nitroreductase |
Protein accession | YP_001189120 |
Protein GI | 146308655 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTT TTTCCAACGA GCAACTTCCC GCCGCGGCTT CACCGGCCGA GCTGCGTGCG CTGATCGAGA GCCGCCGCGC GGTGCGCCGC TTCACCTCCG AGCCGGTGCC GGACGCGGTG ATCCGCGATT GCCTGGAGCT GGCCATGCTG GCGCCGAACT CCTGCAACCT GCAGCCCTGG AGCTTCCAGG TGATCCGCGA CGTGGCCCTG TTGGCGCAGC TGCACCCGGT GTGCATGAGC CAGAACGCCG CCCGTGCGCC CCTGATCATC GCCGTGCTGG CGCGCCCGGA CACCTGGCGC CAGGCCTGTC GCAACGTCAT CGAGCAGTGG CCGGAAGCCG AAGTGCCGGC GCGCATCCGC CACTTCTACA GCAAGACCGC GCCCTTCCAG TACAACCAGG GGCCGCTGGG CCTGCTCGGG CTGTTCAAGC GGCAACTGGT GCGCCTGGTG GGGCTGCGCA AGCCGCTGAT GCGCAAGCCC AACAGCAAGG CCGACATGCG CCTGTGGGCG GTGAAGTCCA CTGCGCTGGC GGCGCAGAAT CTGATGCTGG CCTTCCAGAG CCATGGCTAT GCCACCTGTC CGATGGAAGG CTTCGATGAG GTGCGCCTGC GCCGCGTGCT GGACATTCCG TGCCAGGCCA TCCCCATCAT GCTGCTGGCC GTCGGGCGGC AGGGCGAGAA TGGCGTTTAC AACCCGCGTC TGCGCTTTCC GCTGGAGCAG CAGGTGATCT GGCGCTGA
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Protein sequence | MTSFSNEQLP AAASPAELRA LIESRRAVRR FTSEPVPDAV IRDCLELAML APNSCNLQPW SFQVIRDVAL LAQLHPVCMS QNAARAPLII AVLARPDTWR QACRNVIEQW PEAEVPARIR HFYSKTAPFQ YNQGPLGLLG LFKRQLVRLV GLRKPLMRKP NSKADMRLWA VKSTALAAQN LMLAFQSHGY ATCPMEGFDE VRLRRVLDIP CQAIPIMLLA VGRQGENGVY NPRLRFPLEQ QVIWR
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