| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3592 |
|---|
| Symbol | panB |
|---|
| ID | 5106139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3961992 |
|---|
| End bp | 3962792 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640504845 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_001189072 |
|---|
| Protein GI | 146308607 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACG TTACCCTGAC CACACTGCAG AGCCTCAAGC AAGGCGGTGA CAAGATCGCC
ATGCTGACCT GCTACGACGC CACCTTCGCC CGTGCGGCCT GCCAGGCTGG CGTCGATGTG
CTGCTGGTCG GCGACTCCCT GGGCATGGTC CTGCAGGGTC ACGACAGCAC CCTGCCGGTC
AGCGTCGAGG AAATGGCCTA CCACACCGCC TGCGTGAAAC GCGGCAATCA GGGCGCGCTG
ATCCTGACCG ACCTGCCCTT CATGGCCTAC GCCACGGCCG AACAAGCCAT GAACAACAGC
GCCCGGCTGA TGCAGGCCGG CGCCCATATG GTCAAGCTCG AAGGCGCCGG CTGGCTGGCC
GAACCGATCC GCCTGCTGGC CGAACGCGGT GTGCCGGTCT GCGCGCACCT TGGCCTCACC
CCGCAGGCGG TGAACATCCT CGGCGGCTAC AAGGTACAGG GCCGCCAGGA AGCCCAGGCG
CGGCAGATGC GTGCCGATGC CATGGCCCTG GAACAGGCTG GCGCGGCCAT GCTGCTGCTC
GAATGCGTGC CCAGCGAGCT GGCGGCGGAA ATCACCCAGG CGGTGAAGAT TCCGGTGATC
GGCATCGGCG CAGGCGCCGC TACCGATGGC CAGGTGCTGG TGCAGCACGA CATGCTCGGC
CTGTCGCTGT CCGGCCGCGC GCCGAAGTTC GTGCGCAACT TCATGGAGGG TCAGAGCAGC
ATTCACGGTG CTCTGAGCGC TTACGTCCAG GCGGTCAAGG ACGGCAGCTT CCCTGCCGCC
GAACACGGGT TCTCCGCATG A
|
|---|
| Protein sequence | MPDVTLTTLQ SLKQGGDKIA MLTCYDATFA RAACQAGVDV LLVGDSLGMV LQGHDSTLPV
SVEEMAYHTA CVKRGNQGAL ILTDLPFMAY ATAEQAMNNS ARLMQAGAHM VKLEGAGWLA
EPIRLLAERG VPVCAHLGLT PQAVNILGGY KVQGRQEAQA RQMRADAMAL EQAGAAMLLL
ECVPSELAAE ITQAVKIPVI GIGAGAATDG QVLVQHDMLG LSLSGRAPKF VRNFMEGQSS
IHGALSAYVQ AVKDGSFPAA EHGFSA
|
|---|
| |