| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3557 |
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| Symbol | |
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| ID | 5106104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3922017 |
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| End bp | 3922778 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504810 |
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| Product | ABC transporter related |
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| Protein accession | YP_001189037 |
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| Protein GI | 146308572 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.233351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG TCAACAAACA ACCCAGCGCC GAGCCGATGA TCCTGCTGCA GGGCGTGAAC
AAGTGGTACG GCCAGTTCCA CGTGCTCAAG GACATCAACC TCAGCGTGCA GCAGGGCGAG
CGTATCGTCC TGTGCGGGCC GTCCGGTTCG GGCAAGTCCA CCACCATCCG CTGCATCAAC
CGCCTGGAAG AACACCAGCA GGGACGCATC GTGGTCGATG GCACCGAGCT GACCAGCGAC
CTCAAGCACA TCGAGGCGAT CCGTCGCGAA GTGGGCATGG TGTTCCAGCA CTTCAACCTG
TTCCCGCACC TGACCGTGCT GCAGAACTGC ACCCTGGCGC CGATGTGGGT ACGCAAGATG
CCCAAGCGTC AGGCCGAGGA AGTCGCCATG CACTTCCTCG AGCGCGTGCG CATCCCGGAG
CAGGCGCACA AGTATCCGGG CCAGCTCTCC GGCGGCCAGC AGCAGCGCGT GGCGATCGCT
CGCGCGCTGT GCATGAAGCC GAAGATCATG CTGTTCGACG AGCCGACCTC GGCCCTCGAC
CCGGAGATGG TGAAAGAGGT GCTCGACACC ATGATCGGCC TGGCGCAGGA CGGCATGACC
ATGCTCTGCG TGACCCACGA GATGGGCTTC GCCCGCACCG TGGCCAATCG GGTGATCTTC
ATGGACAAGG GCGAGATCGT CGAGCAGGCC GAGCCCGACC AGTTCTTCAC CAACCCGCAG
AACGAGCGCA CCAAGCTGTT CCTCAGCCAG ATCCTGCACT GA
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| Protein sequence | MSEVNKQPSA EPMILLQGVN KWYGQFHVLK DINLSVQQGE RIVLCGPSGS GKSTTIRCIN
RLEEHQQGRI VVDGTELTSD LKHIEAIRRE VGMVFQHFNL FPHLTVLQNC TLAPMWVRKM
PKRQAEEVAM HFLERVRIPE QAHKYPGQLS GGQQQRVAIA RALCMKPKIM LFDEPTSALD
PEMVKEVLDT MIGLAQDGMT MLCVTHEMGF ARTVANRVIF MDKGEIVEQA EPDQFFTNPQ
NERTKLFLSQ ILH
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