| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3512 |
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| Symbol | |
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| ID | 5105980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3871869 |
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| End bp | 3872366 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640504764 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001188992 |
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| Protein GI | 146308527 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.112818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGA CCACCAAAGG CCGTTACGCC GTTACCGCCA TGCTCGATCT GGCGCTGCAC
GCGCAGCACG GTCCCGTTTC CCTGGCCGAT ATTTCCGAGC GGCAGGGCAT CTCCCTGTCC
TATCTCGAGC AACTGTTCGC CAAGCTGCGC CGTGGCAACC TGGTTTCCAG CGTGCGCGGG
CCCGGTGGCG GCTACCAGCT GTCGCGTGAC ATGCGCGGTA TCCAGGTGGC TCAGGTGATC
GATGCGGTCA ACGAATCCGT GGATGCCACG CGTTGCCAGG GGCAGGGCGA TTGCCACTCC
GGCGACACCT GTCTGACCCA TCACCTGTGG TGCGATCTCA GTCAGCAGAT TCATGAGTTC
CTCAGTGGCA TCAGTCTGGC CGATCTGGTC GCGCGCCGTG AGGTTCAAGA GGTCGCGTTG
CGCCAGGATC AGCGTCGCTG CTCCGGCAGA GGCACTATGC CGCATTTGGA TAAGATTGAA
GCGTCTGCCA TCGAGTGA
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| Protein sequence | MRLTTKGRYA VTAMLDLALH AQHGPVSLAD ISERQGISLS YLEQLFAKLR RGNLVSSVRG
PGGGYQLSRD MRGIQVAQVI DAVNESVDAT RCQGQGDCHS GDTCLTHHLW CDLSQQIHEF
LSGISLADLV ARREVQEVAL RQDQRRCSGR GTMPHLDKIE ASAIE
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