Gene Pmen_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3506 
Symbol 
ID5105974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3867070 
End bp3867411 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content61% 
IMG OID640504758 
Productferredoxin, 2Fe-2S type, ISC system 
Protein accessionYP_001188986 
Protein GI146308521 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGG TGATTTTTCT GCCTCACGAG CGATTCTGCC CGGAAGGCCT GGTGGTAGAG 
GCCGAACCGG GCATCTCGAT CCTCGAGCTG GCGCACCAGC ACCATATCGA GATGGAGAGT
GCCTGTGGCG GCGTGTGCGC CTGCACCACC TGCCACTGCA TCGTGCGCGA AGGCTTCGAC
TCGCTTAATG AGGCGGACGA GCTGGAAGAG GACTATCTGG ACAAGGCGTG GGGCCTGGAG
GCCCAATCGC GTCTGGCCTG TCAGGCGATC GTCGGTGAGG AAGACCTCAC CATTGAAATT
CCCAAGTATT CGCTGAATCA CGCGGCAGAA GCGCCGCACT GA
 
Protein sequence
MPQVIFLPHE RFCPEGLVVE AEPGISILEL AHQHHIEMES ACGGVCACTT CHCIVREGFD 
SLNEADELEE DYLDKAWGLE AQSRLACQAI VGEEDLTIEI PKYSLNHAAE APH