| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3481 |
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| Symbol | |
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| ID | 5107288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3842143 |
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| End bp | 3842526 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504733 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001188961 |
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| Protein GI | 146308496 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATAG AGATGGATAC TTCTTCGCGT ACTACCGAGG TTCTCGATAC CGCCTCTGAC
CAGTCCCTCC CCTTACCGGG CACGGAAGCC TACGAGTCGC TTCCGCAGTT CCCGAAGGGC
AGCCCCCTAC CCTTCCGGCG AACAATTCGC AAGCATGAGC TGAGACAGAT CGTCCCCCTG
GCTGAATCAA CGATCTACGA GATGGAGCGT CGCGGCGAGT TCCCCCGGCG CTTCAACCTG
ACACCACGTT GCGTGGTCTG GGATCTGGCC GAGGTGGAGG CCTGGATCGA GGAGCGCAAG
CGGGCGCCTC GGGTCAATAT CAGCAAGCCG GATGTTTACC TACGGAAAAC CCGCCCTGTC
CGGGCGGGCT CAAGCCAAGC ATGA
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| Protein sequence | MEIEMDTSSR TTEVLDTASD QSLPLPGTEA YESLPQFPKG SPLPFRRTIR KHELRQIVPL
AESTIYEMER RGEFPRRFNL TPRCVVWDLA EVEAWIEERK RAPRVNISKP DVYLRKTRPV
RAGSSQA
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