Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3457 |
Symbol | |
ID | 5105927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3813175 |
End bp | 3814029 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640504711 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_001188939 |
Protein GI | 146308474 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCATT ACATCCTCAA GATCAGTTGC CCGGCCACCT CCGGCATCGT CGCGGCGGTC ACCACCTACC TGGCCGGGCG CGACTGCTAC CTCAGCGAGC TGGCGCAGTT CGACGACGAG TTCACCGGGC GCTTCTTCAT GCGTGCGGTG TTCCGCTTCA ATGACACGAC CCGGGCGGAC ATCGACGCCC TGCGCCAGGG TTTCGATGAC ATTGCCGTGC CCTTCGCCAT GGACTGGGAA CTGTTCGAAA GCCAGCGGCC GATGCGCGTG CTGCTGATGG TGAGCAAGTT CGACCACTGC CTGGTGGACC TGCTTTATCG CCACCACAAG GGCGAGCTGG ACATGCAGAT CACCGCCATC GTCTCCAACC ACCTCGACCT GCGGCCAATG GCCGAGCGCG AGGGCATCCG CTTCATCTAC CTGCCGGTGA CCCGCGACAC CAAGGCCCAA CAGGAAGCGG CGCTGATGAA GATCGTTGAC GAAACGCAGA CCGAGCTGGT GGTGCTCGCG CGCTACATGC AGATCCTCTC CGATGACCTG TGCCAGCAGC TCTCCGGCCG CGCCATCAAC ATCCATCATT CCTTCCTGCC CGGTTTCAAG GGCGCCAAGC CCTATCACCA GGCCTATGAA CGCGGCGTCA AGCTGATCGG CGCCACCGCG CACTACGTGA CTTCGGACCT CGACGAAGGT CCGATCATCG AACAGGAAGT CCAGCGCGTG GACCACGCCT ATCTGCCCGA TGACCTCGTC GCCATCGGCC GGGACACCGA GACGGTGGCC CTCTCCAAGG CGCTGAAGTA CCACCTGGAA CACCGCGTGC TCCTCAACGG CGACAAGACG GTGATCTTCC GATGA
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Protein sequence | MNHYILKISC PATSGIVAAV TTYLAGRDCY LSELAQFDDE FTGRFFMRAV FRFNDTTRAD IDALRQGFDD IAVPFAMDWE LFESQRPMRV LLMVSKFDHC LVDLLYRHHK GELDMQITAI VSNHLDLRPM AEREGIRFIY LPVTRDTKAQ QEAALMKIVD ETQTELVVLA RYMQILSDDL CQQLSGRAIN IHHSFLPGFK GAKPYHQAYE RGVKLIGATA HYVTSDLDEG PIIEQEVQRV DHAYLPDDLV AIGRDTETVA LSKALKYHLE HRVLLNGDKT VIFR
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