| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3347 |
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| Symbol | |
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| ID | 5105819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3694796 |
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| End bp | 3695554 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504603 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001188831 |
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| Protein GI | 146308366 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGG CCCCTCGCCA ACACGACATC CTCAATCTCG CCCGTGAACG CGGCTACGTC
AGCATCGACG AACTGGCCCA GGCCTTCGCC GTCACTCCAC AGACCATACG CCGCGACATC
AATCAGCTGG CCGAGCACGG CCTGCTGCGC CGTACCCACG GTGGCGCCGC CTGCGAGGCC
TCGAGCATTC AGAACACCGC CTACGGCATG CGGGCCGGGC AGATGCGCGA GGAAAAACAG
CGCATCGCCG AAGCCGTGGC CGCGCAGATT CCCGATCATG CCTCGCTGTT CATCAACATC
GGCACCACCA CCGAAGCCAT CGCCCGCGAG CTGCAGAACC ACAAGGGTCT GAAGATCATC
ACCAACAACC TGCACGTGGC CGCCCAGCTC AGCGCCAAGG CCGACTTCGA AGTGCTGGTG
GCTGGCGGCA CGGTGCGCAG CGACGGCGGC ATCGTCGGCC AGGCAGCGGT GGATTTCATC
CAGCAGTTCA AGGTCGACTA CGCCATCGTC GGCATCAGCG GCATCGACGA GGACGGCAGC
CTGCTCGACT TCGACTATCA GGAAGTGCGG GTTTCCCAGG CCATCATCGA CAACGCCCGC
CAGGTGTTTC TCGCCGCCGA CTCCAGCAAG TTCGGTCGCA ATGCCGTGGT CCGCCTGGGC
TCCATCGCTT TGGTCGACCG CGTGTTCACC AACTGCGCGC CGTCGCCCGC CATCGCCCGC
CTGCTGCACA GCCACAAGGT CCAGCTCGAC CTGGTCTGA
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| Protein sequence | MNLAPRQHDI LNLARERGYV SIDELAQAFA VTPQTIRRDI NQLAEHGLLR RTHGGAACEA
SSIQNTAYGM RAGQMREEKQ RIAEAVAAQI PDHASLFINI GTTTEAIARE LQNHKGLKII
TNNLHVAAQL SAKADFEVLV AGGTVRSDGG IVGQAAVDFI QQFKVDYAIV GISGIDEDGS
LLDFDYQEVR VSQAIIDNAR QVFLAADSSK FGRNAVVRLG SIALVDRVFT NCAPSPAIAR
LLHSHKVQLD LV
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