Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3343 |
Symbol | |
ID | 5105815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3690611 |
End bp | 3691717 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504599 |
Product | ABC transporter related |
Protein accession | YP_001188827 |
Protein GI | 146308362 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.328665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC CGTTGCTGCA ACTGCGCGGG CTGAATTGCG GCTACCACGC GCACAAGGTG GTGCAGGACC TCGACCTGCA TCTGAACGCA GGCGACATCG GCTGCCTGCT GGGCCCCTCG GGCTGCGGCA AGACCACCAC CCTGCGCGCC ATCGCCGGTT TCGAGCCGGT GCTCGAAGGC GAGATCGAAC TGGCAGGCGA AGTGATTTCC CGCGCCGGTT TTACCCTGGC TCCGGAGAAG CGTCACATCG GCATGGTGTT TCAGGACTAC GCCCTGTTTC CCCACCTGAG CGTGGCCGAG AACATCGCCT TCGGCATTCG CAAACAACCC AACGCCGAGC GCGTAACCCA GGAGCTGCTG GAGCTGGTCA AGCTCGGCCA CCTGGCCAAA CGCTATCCGC ACGAGCTGTC CGGCGGGCAG CAACAGCGTG TCGCCCTGGC CCGCGCCCTG GCGCCGGAAC CACAGCTGCT GCTGCTCGAC GAGCCCTTTT CCAACCTCGA TGGCGAGTTG CGTCGACGCC TCAGTCATGA GGTGCGCGAG ATTCTCAAGG CGCGCGGCAC CAGCGCCATT CTGGTCACCC ACGATCAGGA AGAGGCTTTC GCCGTCAGCG ACCACGTCGG CGTCTTCAAT CAGGGCCGTC TGGAGCAGTG GGATACGCCG TTCAATCTGT ACCACGAGCC GCTCACCCCC TTCGTCGCCA GCTTCATCGG CCAGGGCTAC TTCATTCGCG GCCAGTTGCT CAGCCCGGAT ACGGTGCAGA CCGAGCTGGG AGTGATTCGC GGCAACCGTG CCTATACCTG GGCACAGGGC AGCGCGGTGG ACGTGCTGCT GCGTCCGGAC GACATCGTCC CGGATGAGAG CAGCGGGCTG AAGGCGCGCA TCGTCGGCAA GACCTTCCTC GGCGCCGCCA CTCTCTATCG CCTGCAGCTA CCCACCGGCA GCCAGCTGGA ATCGATTTTC CCCAGCCATG CCGATCACCT GCCGGGTGAC GAAGTGGGCA TCCGCATCGC CGCCGATCAC CTGGTGGCCT TCCCGGCTCT GGGCAGCGTG GCGGCGCAGT TGCAGCTGAC CGACTCCGGC GGCGTGCGCC GGGTCAGCAG CAACTGA
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Protein sequence | MSEPLLQLRG LNCGYHAHKV VQDLDLHLNA GDIGCLLGPS GCGKTTTLRA IAGFEPVLEG EIELAGEVIS RAGFTLAPEK RHIGMVFQDY ALFPHLSVAE NIAFGIRKQP NAERVTQELL ELVKLGHLAK RYPHELSGGQ QQRVALARAL APEPQLLLLD EPFSNLDGEL RRRLSHEVRE ILKARGTSAI LVTHDQEEAF AVSDHVGVFN QGRLEQWDTP FNLYHEPLTP FVASFIGQGY FIRGQLLSPD TVQTELGVIR GNRAYTWAQG SAVDVLLRPD DIVPDESSGL KARIVGKTFL GAATLYRLQL PTGSQLESIF PSHADHLPGD EVGIRIAADH LVAFPALGSV AAQLQLTDSG GVRRVSSN
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