Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3300 |
Symbol | |
ID | 5106807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3643072 |
End bp | 3643947 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640504557 |
Product | gluconolactonase |
Protein accession | YP_001188785 |
Protein GI | 146308320 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.875463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCG AACTGATCCT CGATGCCCGC AATGCCACCG GCGAAAGCCC GGTGTGGCAC GCCGCCGAAC AGGCCCTGTA CTGGGTCGAC ATTCCCGCCG CACGCCTGCA TCGCTGGAGC CTGCGCGATG CCAGCAGCCG GAGCTGGCAG GCCGGGGAAA TGCTCGCCTG CATCGCCCGC CACCCGGCCG GCGGCTGGCT GGCCGGCATG CAGAGCGGCC TCTTCCATCT GCATCCGCAG GACGATGGCA GCATGCAGGC CTCACGCCTG GCGCAGGTCG AACACGCCCG GCCGCAGATG CGCTTCAACG ATGGACGCTG CGACCGCCAG GGGCGTTTCT GGGCCGGTAG CATGCTGCTG GACATGGCCG CAGGCGCCCC CGTCGGCGCC TTGTATCGCT TCGACGGCCA GCTGGAGGAA TGCCTCGCCG ATCTTGTCGT GCCCAACGGC CTGGCCTTCA GCCCCGATGG CCGCACGCTG TACCTCTCCG ACTCGCACCC GAGCGTGCAG GCCGTGTGGG CCTTCGATTA CGACACCGAC AGCGGCACGC CGCATAACCG CCGCTTGTTC ATCGACATGC AGCAGCACCC CGGTCGCCCG GACGGCGCCG CCGTGGACGT CGACGGCTGC TACTGGATCT GCGGCAACGA CGCCGGACTG ATCCACCGCT TCACCCCCGA CGGCCGCCTG GATCGTTCCC TCGCCGTGCC GGTGAAGAAG CCGGCGATGT GCGCCTTTGG CGGGGCGAAG CTGGACACCC TGTTCGTCAC CTCGATTCGC CCGGATGGCG ACCTCGCCGA CCAGCCGCTG GCCGGCGGCG TGTTCGCCCT GAACCCCGGC GTGGCGGGGA TCGAGGAGCC CGCCTACCGC GCCTGA
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Protein sequence | MQAELILDAR NATGESPVWH AAEQALYWVD IPAARLHRWS LRDASSRSWQ AGEMLACIAR HPAGGWLAGM QSGLFHLHPQ DDGSMQASRL AQVEHARPQM RFNDGRCDRQ GRFWAGSMLL DMAAGAPVGA LYRFDGQLEE CLADLVVPNG LAFSPDGRTL YLSDSHPSVQ AVWAFDYDTD SGTPHNRRLF IDMQQHPGRP DGAAVDVDGC YWICGNDAGL IHRFTPDGRL DRSLAVPVKK PAMCAFGGAK LDTLFVTSIR PDGDLADQPL AGGVFALNPG VAGIEEPAYR A
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