Gene Pmen_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3294 
Symbol 
ID5106801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3636949 
End bp3637278 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content64% 
IMG OID640504551 
Productbranched-chain amino acid transport 
Protein accessionYP_001188779 
Protein GI146308314 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT GGTTGCTGAT TCTCGGCATG CTGGCGATCA CCTTCGCCAC GCGCTACAGC 
CTGTTCGCCT TTCCCGATCT GCGTTTCCCG CCCCTGGTCA GGCAAGGGCT GCACTACGTG
CCCACGGCGG TGCTGACGGC CATCGTGGTG CCTGGCATGT TGCTGCCGGA CGGGCAGAGC
TGGGCGCTGA ACTGGAACAA CGCCTACCTG CTGGCGGGCC TGGCTGCCAT CGCCATTGCC
GCTTTCACGC GCCATCTGCT GGCGACCATT GGCGGAGGGT TGCTGGTGTT CTTCCTGCTG
CGCTGGGCGT TCGGCCAACT GCCGATCTGA
 
Protein sequence
MNIWLLILGM LAITFATRYS LFAFPDLRFP PLVRQGLHYV PTAVLTAIVV PGMLLPDGQS 
WALNWNNAYL LAGLAAIAIA AFTRHLLATI GGGLLVFFLL RWAFGQLPI