Gene Pmen_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3270 
Symbol 
ID5106777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3620771 
End bp3621655 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID640504527 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001188755 
Protein GI146308290 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG TTGCCGCCTG CCAGTACCAC ATCGATCTTT TCACCACCTG GGATGCCTAC 
GCCGAGCACC TCACCACCCT GTGCGAGGAA GCGGCCGGGC AGGGCGCCGA GTTGTTGCTG
CTGCCTGAGT ACGCCGGTCT GGTGCTGACC GGTCAGTTGC CGGAGGCCGA GCGCAGCGAC
CTGCACGGCT CCATCGCCGA CATCCAGCCA CTGCTGCCGC GCTGGCTGGA ACTGTGCGAA
AGCCTGGCGC GGCGGCTCAA GGTCCATCTG CAACCCGGTT CGGTGGCCGT GCTGGATGAC
GATGGCGTCT ACCGCAACCG CGCCTGGCTG TTCGGCCCGG ACGGCTGCCT GGGCAGTCAG
GACAAGCTGA TCATGACCCG CTTCGAGCTG GAGCAGTGGC ACATCGCGGC CGGCAGCGGG
CTCAAGGTGT TCGACACGGC GCTGGGCAAG CTGGGCATCC TGATCTGCTA CGACAACGAA
TTCCCGCTGC TGGCGCGTAC CCTGGCCGAG GCGGGTGTGG ACCTGATCCT GGCGCCCAGC
TGCACCGATA CCGAGGCCGG TTTTCATCGT GTGCGCATCG GTGCCCAGGC GCGTGCCCTG
GAAAACCAGA TCGCCGTGCT GCATTCGCCC ACCGTGGGCC TGGCACCCTG GTCGCCGTCG
CTGGACGAAG GCTACGGCCG CGCCTCGCTG TACGTGCCGT CGGACTACGG CATGCCGGCC
AGCGGCATCG TCGCCGAGAG CGCGGAGCTG TGCCCCTCGC GCAGTCATTG GCTGATCTGC
GAGCTGGACC TGGACGAAGT GCGCCGCGTG CGCGAGCAGG GCCAGGTATT CACCCGCCGC
GACTGGCCGC GGCAGTTCGA CGACGGCCGG CTGGTGCTGC GTTGA
 
Protein sequence
MIKVAACQYH IDLFTTWDAY AEHLTTLCEE AAGQGAELLL LPEYAGLVLT GQLPEAERSD 
LHGSIADIQP LLPRWLELCE SLARRLKVHL QPGSVAVLDD DGVYRNRAWL FGPDGCLGSQ
DKLIMTRFEL EQWHIAAGSG LKVFDTALGK LGILICYDNE FPLLARTLAE AGVDLILAPS
CTDTEAGFHR VRIGAQARAL ENQIAVLHSP TVGLAPWSPS LDEGYGRASL YVPSDYGMPA
SGIVAESAEL CPSRSHWLIC ELDLDEVRRV REQGQVFTRR DWPRQFDDGR LVLR