Gene Pmen_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3249 
Symbol 
ID5106756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3600362 
End bp3601165 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID640504506 
Producthypothetical protein 
Protein accessionYP_001188734 
Protein GI146308269 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCAC GCCAAGCCTG CCTGCAGTGC CTGCAACGCG ATCCGCCCGC CCTGTTCGAA 
GCGGCGTTGT GGATCGCTGC GGAACATGAT GCCCAGTTGC AACCGGCCAG GGTGCTCGAC
GAGCTGCAGG GGTTGCAGCT GCAGGTCAGC GCCGGCCTGC CCGCGCTGCC CGCCCGCGAG
CTGGCCCAGC CGCTGCTGCG CCGCCTCGCC GAGCTGGACT ATCAGGAAGA TGACGAAGGC
ATGACGCGGC CGCAGCATGC CCTGCTGCAC AAGGTGCTGC GCAACCGCCG CGGGCAACCG
CTGGTACTGG CGCTGATCGC CCTGGAACTG GCGCGACGGC TGGATATTCC CCTGCAGGGG
GTGAACTTCC CCGGCCACTT CCTGCTGCGC GTACCCGGCG CCGACCATCT GCTCGATCCC
TGTGGCGGGC GCCGCCTGTA CACCCGCGAC TGTCGGGACC TGCTCCACCG CCAGCTCGGC
CCGAATATCG AGCTGAGCGC AGCGCACCTG CAGACCGCCG ACGCCCCTGC CATGCTGCAA
CGCCTGTCGC GCAATCTGCG CCTGCTGCAC CTGCAGCACG ATGATGCCCT GGCTGCGCTC
AAGGATGCCG AGCGTGTCCT GCAGCTTGGC CCGCCAACCC TGGTCGATCA CCTGGCTCGC
GCCGATGTCT ATCAGCAGCT GGAGTGCCCG CAGGGCGAAC GCTACGACCT CGAACGCGCG
CTGCTGTTCT GCGAAGACGA AGGCCTGCGC CTGCAATTGC AGCAGCGTTT GCGCGGTCTG
GAAAGCGCAG CGGCATTGCA CTGA
 
Protein sequence
MSPRQACLQC LQRDPPALFE AALWIAAEHD AQLQPARVLD ELQGLQLQVS AGLPALPARE 
LAQPLLRRLA ELDYQEDDEG MTRPQHALLH KVLRNRRGQP LVLALIALEL ARRLDIPLQG
VNFPGHFLLR VPGADHLLDP CGGRRLYTRD CRDLLHRQLG PNIELSAAHL QTADAPAMLQ
RLSRNLRLLH LQHDDALAAL KDAERVLQLG PPTLVDHLAR ADVYQQLECP QGERYDLERA
LLFCEDEGLR LQLQQRLRGL ESAAALH