Gene Pmen_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3248 
Symbol 
ID5106755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3599239 
End bp3600261 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content71% 
IMG OID640504505 
ProductGlu/Leu/Phe/Val dehydrogenase, dimerisation region 
Protein accessionYP_001188733 
Protein GI146308268 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCA TGATGGAAGC CGCCCGCCTC GAGGCCCTGC ACCTGGCCCA GGATCCGGCC 
ACCGGCCTCA AGGCCGTCAT CGCCATTCAC AACACCCGAC TCGGGCCGGC TCTCGGCGGC
TGCCGTTATC TGGCCTACCC CGACGAGCAG AGTGCCATCC GCGATGCCGC GCGCCTGGCC
CAGGGCATGA GCTACAAGGC CGCCCTGGCC GGCATCGATC ACGGCGGCGG CAAGGCGGTG
ATCATCCGCC CGCCGCATGT CGCCAATCGT GCGGCGCTGT TCGAGGCCTT CGGGCGCTTC
ATCGAGACGC TGGGCGGTCA CTACATCACC GCCATGGACA GCGGCACCTC CAGCCTCGAC
ATGGACTGCA TCGCCCAGCA CACCCGCCAC GCCACCAGCA CCACCAGTGA GGGCGACCCG
TCGCCGCATA CCGCGCTGGG GGTGTTCGCC GGCATACGGG CCACCGCCCA GGCGCGCCTC
GGCAGCGATG ACCTGGAGGG GCTGCGCATC GCCATCCAGG GCCTTGGCAA CGTCGGTTAC
GCCCTGGCCG AGGAGCTGCA CGCGGCCGGT GCCGAGCTGC TGGTCAGCGA CCTCGACCCC
GGCCGGGTGC AGCTGGCGGT GGAGCAGCTC GGCGCTCACC CGATCGCCAG CGAGGCGCTG
CTCACCACGC CCTGCGACAT CCTCGCGCCC TGCGGTCTGG GCGGCGTGCT CAACGCACAG
ACCGTCGGCC AGCTGCGCTG CGCCGCGGTG GCCGGGGCGG CCAACAACCA GCTGGCCAGC
CCGGAGATCG CCGACGAGCT GGAGGCGCGC GGCATTCTCT ATGCGCCGGA CTACGTGCTC
AACGCCGGAG GGCTGATCTA CGTGGCGCTG CGTCATCGCG GCGAGGAACT GGCGGCGATC
ACCGCCCACC TGGCGCAGAT CAGCCTGCGT CTGACGGAAA TCTACGCCCA CGCCCAGGCC
GACAAGCGCT CGCCGGCGCG AGTCGCCGAC AGCCTGGCCG AGCGTCTGCT TTACGGGCCC
TGA
 
Protein sequence
MFSMMEAARL EALHLAQDPA TGLKAVIAIH NTRLGPALGG CRYLAYPDEQ SAIRDAARLA 
QGMSYKAALA GIDHGGGKAV IIRPPHVANR AALFEAFGRF IETLGGHYIT AMDSGTSSLD
MDCIAQHTRH ATSTTSEGDP SPHTALGVFA GIRATAQARL GSDDLEGLRI AIQGLGNVGY
ALAEELHAAG AELLVSDLDP GRVQLAVEQL GAHPIASEAL LTTPCDILAP CGLGGVLNAQ
TVGQLRCAAV AGAANNQLAS PEIADELEAR GILYAPDYVL NAGGLIYVAL RHRGEELAAI
TAHLAQISLR LTEIYAHAQA DKRSPARVAD SLAERLLYGP